Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTLSVLFEQISP-YLPPQE----ALKVENIEDGYSNHVMKLHWYNA---PRAVLRVPMLDTEAFLIDRHAELNALKAAQNAGISPTVIWSNDQGAILSEYIHAPALSWDVKHNSRDIKRIGALFTQVHALSVNAPS----RN----IYQVIEHYVGGIEHHD----T-NGAHKHEVAYLQHCFDQ------------MNK-VDSRGRPDVLCHNDLNPKNVLLNNEEIWFIDWEYTALGDPLFDLAAVSRSHNL------------------TLDQQKILIEAYDDTLNV----------QDTLKTIHDYGFAYALREMAWLLLKHVISVDDHQSLDYYREFKDTKKLNPFI
3MES Chain:A ((50-402))--DTEIIIGICRKNIPGWKEINESYIEVKQIFSGLTNQLFVVSIVNELKHPRILFRIYGKHV--KFYDSKVELDVFRYLSNINIAPNIIADFP-EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLLQTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLISHITWGLWSIA-----------VEFDFTEYANTRFTHY-


General information:
TITO was launched using:
RESULT:

Template: 3MES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1031 -20472 -19.86 -74.71
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -19.86
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_3MES.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3mes-query.scw
PDB file : Tito_Scwrl_3MES.pdb: