Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEYRKINLEELEKLKNLYVYENFEEIKKQIIDDISNGIKDIYVITENENLIGEITVTYKSDLPNETIPDIRVYLSAFRVHKDYQDQGLGQKLLKYVISELENKGITEFTVGVEDDNENAKHIYEKFDFTEIIDRGEETVKGRTYQYNLLLRKSNTKKMEKLIKKFDLGS-----QIIKVTQIHGGLSNRLYRVETDQ----------AKYAIKKLNKTLMQNKAEFERIIFAEKVARIAEENGILVVRALEFENKIIHKIDGDYYMIFNWNYGSHIQPEDV-TDEICNIIGELLAKIHNLDFSKIEAEKS---KEMQIRTIDWNSLAKIAKEQNKYYYKDLV---ENIEILYEINKKTNEALEYAKSNLIISHRDLIKKNILWNNNIPTVIDWESSGYVNPTVELVQVCWNWANGD------------VGKFEFEKFEIIVNSYLQNIKN---YKKE----DMKKLIYANLWEAIEWLEYNLKRSLCIESTYRKEEIELAEEQINYLNYEIRYAMTQIKAVADSLQI
3C5I Chain:D ((11-328))-------------------------------------------------------------------------------------------------------------------------------------------------------LTDPLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---D-ELYNTISEFEVYKTMSKYKI-APQLLNTF---------NGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIE-KYNCDIHKYIKESDKFIKFMKVYS-KSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSII--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1055 20297 19.24 74.35
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : 19.24
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: