Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQIVEDAGSLDVFRWPSSSPPSPENLEHAARLCQGALGSTSVAVVATPYNHAGWSAQDCIKVSFPSENRSFIAKVPRLVDENSATACKNEAQRASWASQHQIG--PAVIAID--------DLSGAFAMEFLSGQTLSAQMMLQDHLKTCTIGLLRRIHDAPSQHYMQ----IYNAPAAVKRMLQAAD----K----ERL---LDGDD---GLLLESLITWTFQKVG-CQPTFQTLVPCHNDFHSQNIMLDQQGTLWAIDFEDCDLGDPMWDLGYLTANMGLE---PL--D-LAGIY-GCNMEQKKRLEVFYYLAIGHCAVWSAIHGPLWTQHYRDCMLRLRRGWLRL
3I1A Chain:B ((6-290))------------------------IQAQQLIELLKVHYGIDIHTA--QFIQ-GGAD-TNAFAYQADSESKSYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQN-LTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINVD-KTILSYYRHERIVEDIA---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 949 -35559 -37.47 -142.81
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -37.47
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: