Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAPPAVGQRTAWVDVPGDVRRGIEDVLGAPVIHAESQSGGFSPGTADRVR-TSTGRRAFVKAVSPDQ--NPDSPEIHRREADYLAVLPASSRLPKLIGRYDD----GYWIAMVMEEIDGECPPVPWSGAQVETAMETLAALAADLTPNPLPGLEPISEGFSPLFAGWRRLKDDPPTDLDPWIAARLDDLIELSESTLPRIDGDTVVHCDVRADNLLVRADGSMVVVDWPWA-----------LSG-----ADWLDRFMLLINIDLYG-----GHDVEDLVARHLTH--VDPDLITGTLAGLCAFFVDSARQPPAPGLPTLREFQRAQGDSTLAWLRRRLTGDRGV
1O6Y Chain:A ((23-298))--TPSHLS---------DRYE--LGEILGF---------GGM--SEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDG----------------VTLRDIVHTE--GPMT---------------PKRAI--------EVIADACQALNFSHQ------NG--IIHRDVKPANIMISATNAVKVMDFGIARAIAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENR-YQ-TAAEMRADLVRVHN------


General information:
TITO was launched using:
RESULT:

Template: 1O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1124 -21083 -18.76 -91.67
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -18.76
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_1O6Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1o6y-query.scw
PDB file : Tito_Scwrl_1O6Y.pdb: