Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAPTDSIYAYLTAAPASGF-----AGLSVEILEHWRGDENLLWRVRAGS---------EEAVVKLFLDAGQA--R-GRRQFDGQQLFAATGIAPEPLWFDRYPEGLARQVLVYRWVEGRALQPD---DADDLTALVASLAAVHGGDVATVRRIS-PRALNLEYFWSMLSGGLK-PTQQWLEKSGYPQMAAFLRELEARGQTLVAEGLPLWHAAPPTPIHGDPRPENVVIQA-------GRAVLLDWELFGLGDPALEMAELLHQQRM----------------RWPGALQEHLLAEYASLSG--------------DAAVVARVQLYRKLLPLRDAAFLVSGAQQVSPTERMQPEYDQALPMLIETSTRALMESAEALDDRLVSDAANLRDEVEHLFTSHQNS
5FUT Chain:A ((11-369))------RAYLWCKEFLPGAWRGLREDEFHISVI--RGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-----GAEAMVLESVMFAILAERSLGPKLYGIFP-------QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFG-TMEKYLKEVLRIKFTEESRIKKLH--KL---LSYNLPLELENLRSLLES--TPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISS----IEFGYMDYAQARFDAY------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1059 -23599 -22.28 -85.19
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -22.28
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: