Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVIDVGGEVREGEELDIGAVENWLKNQGVELVGPAVVTQYTGGASNWTYRLKYE-NTNLILRRPPKGTKAKSAHDMAREYMVQKNLAPYY--PVLPKMVALCQDEAVIGCDFYVMERIEGIIPRAKLPPE-----LSFNEEDVHELCVNVIDKLIELHQVPYENTPLAELGKGTGYCRRQVEGWDKRYEKVH---TINVPSFKYVRKWLNDNIPQDSTTCIIHNDWRFDNVILNPEHPTEVIGVLDWEMATLGDPLMDLGSALAYWVEPTDNMIFRSTRRQPTHLKGMFSRKEVVDYYLQKTGLEPQNWTFYEVFGVFRLAVIAQQIYYRYYHKQTRNPAFKDFWIVIHALHIRALKLIAQQKLQESEFAQQSLQKIQGILRR
5UXA Chain:A ((3-258))---------------KDIKQVIEIAKKHNLF-LKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRRED---VMPRTKVEKQALDLVNKYAISFQAPNWIIYT-------EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTP--EEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKD--ANVTGLIDWTEAKVTDVSHDFIFNYRAFG--------------------EEGLEALILAYKEIGGYY------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 986 -25248 -25.61 -103.05
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -25.61
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: