Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPDRPEAEIEAMSALFARHLPGLAARSVTRLGEGMDHVAYEAD---G-GLILRMSKEPDPARRADRIRREAALLALVAEI-SPLPVPRVILSDPDAGVLGYVKLPGRPLAERPV------------AEPGRLAPALGEFLTRLHLAPPERFSALAAPD---TQPLTAWLAEAERHHRAVAAHLPAAARRRIEAFLGGAPPAEPRALAFCHNDLGAEHVLAE-GGTVTGVIDWSDAEIADPAYDLGLLYRDLGPEVTASILAHYAAPWD---DAAGRRAVFYARCALLEDLAYGLRTGPRRYAEAALAHLDRTFSAWG
5UXA Chain:A ((4-299))--------DIKQVIEIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVM---PRTKVEKQALDLVNKYAISFQAPNWIIYT--EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKF-G-VGENLWNRWQAWLNDD-DMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEALEV------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1197 -5468 -4.57 -20.10
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -4.57
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: