Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDATDELATLIARGLGV---LRPKRLHAGAEAVAYELDD---ARVLKVYHAGGS-AERFATIASFYARLNS-DRAGFAVPRILTHGVE----------GGRAYSVEKRLLGEPLSTRAHFLTDTDLIDAYLAAALRVGRIQVEPEWNSWTMFGEQRHGDW--HQHVRGQIESQSRALARM--LQPAYWERLANATADVRQHFDRP--FLGKVCLIHGDFHPGNVLVGATG--RVLSLVDFGAFTTFGDAAFDVATACGYFSMY--EPDQATTRRSLVARLLRMEGSPPGALVAMYLKLAAFLTCTAYPDDRVAVQDTGHFQWAMSVLFDPMLDELVDRVPH
6EF6 Chain:A ((29-320))------TIAQQALTHYDVSDNASLRLL-NLSENATYLVEDGEHQSILRVHRQDYHQPHEIESELDWLAALRTDS--DVTVPTVVPARDGRRVVTVDPADVPRHVVHFEMVGGAEPDEESL---TLDDFQTLGRITASLHEHSQRWTRP-AGFG----RFSWDWEHCLGD-TPRWG-RWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDD-CGFGWYFYDFGTAVSFIEHDPRLGEWQESWVAGYR-SRRELPAADEAMLPSFVFLRRLLLLAWMGS--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1168 -9967 -8.53 -38.19
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -8.53
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: