Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSDEASRFLAE-LGIADDSVTPITGGWASWTFATG---SGRILRVARNPEIDAAHRRESRLLPELAEAVSFAVPAPTHFGVH-KGMTYMVYPRLPGRGLEPGD------RVRAVAPMLAELHAFPVDRAAELLGCAVTAEAWRDDYLEIGKWVEGE----VLPVLDGELRDRVRREYDATLP--DLAAISPALIHRDLGCEHILTDPETGMPTGIIDFETATVGDPAIDYVGLLVT-----FGEQVTRELIAASGSEISWRLVRFYHWLGAAHAVKYGLAERDDAIVADGIEGLRRRLPG
3W0S Chain:A ((8-282))--ATSVEKFLIEKFD-SVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCAD---GFYKDRYVYRHFAS-AALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNG--RITAVIDWSEAMFGDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDGN-----------------


General information:
TITO was launched using:
RESULT:

Template: 3W0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1106 -32929 -29.77 -130.15
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -29.77
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_3W0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0s-query.scw
PDB file : Tito_Scwrl_3W0S.pdb: