Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIRHPTRDTDILRLLQMLGIEASRIVEYRHGIAARNFHIVCMDGTTRVVRYDTRRTAADIREDRMLGT------LAVRNGINAPTGN-WLIHELGNATVVIRQHLAGTTLAELPPATWPDARRLGEVLRSIHEFPQPVIARKFFYAPVLDMLDRQWQTIRDAVASIAETA---DLAALLRYALQQFDHATE----------IETLR-LSPTGLIHGDFTPANILIHEHGLTVL-DWEKSCIGPVCADIAQSLYYFTA-----------HSSK-----IGIFATSFLEG----YGKPDWYKPDVIKAWMT----LHPAFILLTDAANTFINQRLPLPARNP-HR-------------EAYFRDVS---------VPRYRAYLAHQRDLLSIVS
1VZO Chain:A ((31-352))------------------------QLLTVKHELRTANL----TGHAEKV-------GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT------------ERQVLEHIRQSPFLV---TLHYA---------FQT-ETKLHLILDYINGGE----LFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLL---MKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDV-----


General information:
TITO was launched using:
RESULT:

Template: 1VZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1162 -22406 -19.28 -89.62
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -19.28
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.216

(partial model without unconserved sides chains):
PDB file : Tito_1VZO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1vzo-query.scw
PDB file : Tito_Scwrl_1VZO.pdb: