Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEPPLNRTNIFFGESHSDWLPVRGGESGDFVFR-RGDGHA---FAKIAPASRRGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMGQQ--------LGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
4GKI Chain:A ((35-269))-------------------------GQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAF-MPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV-----LEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFS-----PDSVVTHGDFSLDNLIFDEGKL--IGCIDVGRVGIADRYQDLAILWNCLGE--FSPSLQKR----LFQKYGIDNPDMNKLQFHLMLD-----


General information:
TITO was launched using:
RESULT:

Template: 4GKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 920 -2190 -2.38 -9.82
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -2.38
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_4GKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gki-query.scw
PDB file : Tito_Scwrl_4GKI.pdb: