Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSDEASRFLAELGIADDSVTPITGGWASWTFATGSGRILRVARNPEIDAAHRRESRLLPELAEAVSFAVPAPTHFGVHKGMTYMVYPRLPGRG---LEPGDRV-------------RAVAPMLAELHAFPVDRAAELLGCAVTAEAWRDDYLEIGKWVEGEVLPVLDGELRDRVRR--EYDATLPDLAAISPALIHRDLGCEHILTDPETGMPTGIIDFETATVGDPAIDYVGLLVTFGEQVTRELI---AASGSEISWRLVRFYHWLGAAHAVKYGLAERDDAIVADGIEGLRRRLPG
5IGJ Chain:A ((42-283))------------------------------TVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVP---DWRVANA-ELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREF--VVNDKRLHRWQRWLDDDSSWPDFSVV----VHGDLYVGHVLID-NTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALD-----------------


General information:
TITO was launched using:
RESULT:

Template: 5IGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 911 -44179 -48.49 -199.90
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -48.49
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_5IGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igj-query.scw
PDB file : Tito_Scwrl_5IGJ.pdb: