Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLPRRPDADPAALLAGLDRSLAGLGLTEVGEGFDNIAYAVRSPSGARLLLRVSKVADPVERA----RVLTKDVALLEFANRHSSLTTNEVIAADAHAGALLLTEVTGRTADQIRPTDRVAFAATMATFLTRLHTAPVVEAALVTEMDPRSAAQ----WLVDTATAWAAVADRTPVTLRDRVDEFLV--GPAPSDVRRITFCHNDLGDEHVVLSEDGGHVRGVIDWSDAVLGDPARDLGLLTLDFGPGIVDALIDDYHGPTGADFRGRVLWFAATAGVEGLAWRLANARPWQVTADRLHDVLAVLA
5UXC Chain:A ((17-247))----------------GLDLDGGTLRTEEIGLDF-RVAFA-RAHDGGDWVLRLPRRPDVLERAAVEGRLLAMLAPHLDVAVPDWRISTSELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAV-DAEAAAATGIEVRSPAQVRGAWRQDLARVGAEF--EIAPALRERWEAWLADDGCWPG---HSVLTHGELYPAHTLVEDE--RITAVLDWTTAAVGDPAKDLMFHQVSAPSAIFEVALQAY-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 889 -33184 -37.33 -150.15
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -37.33
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.261

(partial model without unconserved sides chains):
PDB file : Tito_5UXC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxc-query.scw
PDB file : Tito_Scwrl_5UXC.pdb: