Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGHPPPWTASPLFFLLLFWHAPPSLVSSCLHAGHALHVHPAHNPSLPPLSLPSDRPGAAGDGQTGASLVHNARAALPLCASRVFAGGALQPSTAVPPRTQPLHRCARRYAPSGRLLLKPRLGLKALPIHEVAEGRAEQEDRARPPDPSVSGRTLTCVTLRTKETCNDADCGGLACRTGNATIAGRGARASDGRQPPTKQEGVFPVATSFRFSSRSLRSSTPLSRYFLSSSPSENKFEFHHFLSYTVTAELPTSAFTFVDAPQSLTSCADVWSHPCRAFVFFPLQRSRTSVGFSPSSHSIRPSPRRWFSSVNLCALRASFGSIASSCSSPVGPDHSSLTAVAITRAVRCFPSHSAPFPPSSSCDLLSASSPSHASLPACSASASSSSPPSRARPTVCLYVPRTHSPRPPRSVGSAASPSSGGPRVSQSEGTPSGPVDSPLSPTSRGSCSYSTPSVSCPGGLLLSLPSVSPVSLSTSLRHFLVSYTSPFPARSLPLIFVDAGLSLASDASLHAARPVGLSQEHRETCASALGSLIDTAVASNAVAQTSCECRPRGLPIVYSPRLVPPSFPRNHCLQPQKLGRLFSFLTHPSGASNLRTPESGVTKTWEAREAEIAKATSGVEGSHEFRWDYVTVHSDLRPKRLNSDHPVTKAGIGVGENRGREKNGEDGRPSEAGCEKSTSPSHALSPSASVPHGPVDATRQNGCGRDDPPRCTHPAGVQVTAGNELNRNPLLAGSHDQHMDSTRATLGTSVSSCFSLFSPIHDADVTRAWLQVVHAPEYVCAASAAVLSEE-----EE----RKIGFPVTKGYADKSLAEVSSTVLGTWLAFH--FGLACVVGGGTHHAKTDSGGKFCVFNDVAVAAALALKQGIAERILILDLDVHQGDGTAEIFSNEPRVKTVSIHCED-NFPFPK----------AQSDVDIGLPAGTGDEVYLRQLNEVG
4LY1 Chain:C ((20-239))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGHPMKPHRIRMTHNLLLN-------YGLYRKMEIYRPHK---ATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLK--YHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII


General information:
TITO was launched using:
RESULT:

Template: 4LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 885 -65483 -73.99 -330.72
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.56

3D Compatibility (PKB) : -73.99
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.067

(partial model without unconserved sides chains):
PDB file : Tito_4LY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ly1-query.scw
PDB file : Tito_Scwrl_4LY1.pdb: