Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------MISLESLEENFRFLTLEVANQARATRDIL------GKPEKELVERLIARDDYIDNLKTIIENKCFSRIHAEEGAEQSESNRIRAIHIICVNLERIAD---HCVNIVRQIKHFSDPTF-LHRYEFHSMFNLIQS-GLDMILPVQRSQKVAQALTICKIEHELDNQYKERFDQIQDEMRAQHNADVGDLITALFIFRYLERIGDALLNVGEAFIFAFLGEKIKIHQFQALQETLSQAGYEGSLSEIDFESIWGGRSGCRIRRVKNTNPDPSKEVIFKEGQKEKIQQERDNIDRWSDLFPGIAPHVVGYNEGGNYASMLVEFLPGCTLDEVVLTTEPEQVRNALFVFEQT---------LVDVWEDTID---PQDHPSPGFIKQLSGRLDKIQQVHPGILTPHKRIGRITIPSLRKRLEQGTALEQAVQAPFTVLLHGDCNLNNVVYDFEEQRIRFIDLYRSRQADYIQDVSVFLVSNFRMPIFEP----SLRARLNWTIRHFYHFARGFAAKHGDTTFSFR--LALGLCRSFLTSTRFELDTEFAYEMAERGGYLLDRLLEHGSKHQEEFTFPEAVLYY--------------------------
4XDN Chain:A ((24-640))GDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYNFDLAELYIS-SLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIP--EDALQELRSTE-----LHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFH----------YKELKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQTLLKGAVVLGPSPGYVRLLQAMKVQFE--GGGAVEEYTRLAQSGGTS--SEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNPIWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVNRFKLKKALLLQILVNYLGGRMLEHDLGEIYAISAK---CFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS


General information:
TITO was launched using:
RESULT:

Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2162 17797 8.23 34.03
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 8.23
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_4XDN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4xdn-query.scw
PDB file : Tito_Scwrl_4XDN.pdb: