Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINDMKISLPQSLKSFIGNQPL-QKDKVGQSPSDVYSFTKNNEKYYLKTTELIYAQTTYSIIREAKILDWLDGKLNVPELVLMDTDHENEYMISKAVPAKPLQDFTGKS--DQFFIDIYTDALAQLQSISIKNCPFISNKKFRLAEAEFFIENGLLD---ELDDDEKDLKLWSSYQNFAEFLDDLKQQNFQE-EYVFSHGDLTDSNVFLSHDAQIYFLDVGRAGIADRFVDIAFIERSLREDCS-EDAALQFLNHLAE-DDSFKRNYFLKLDELN
1L8T Chain:A ((3-262))------MRISPELKKLIEKYRCVKDTEGMSP-AKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT--PFKD----PRELYDFLKT-EKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDEL-


General information:
TITO was launched using:
RESULT:

Template: 1L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1149 49955 43.48 199.02
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 43.48
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1L8T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1l8t-query.scw
PDB file : Tito_Scwrl_1L8T.pdb: