Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVEDVRLGAELERLTEGATWCPVWHLQRPLSPTTATAAPPLP-SSTYLKMAPA---GTLAADVAVMQLLKSCDVPAPHVLHYAQGGEGQADFLLISALAGVHGATAEAL--SRPEALVRSFAGGLQSLHGQHSTALLRSAEDLGAKFDRRVAVRVARVERRLRVG---EVPGHAERLEAILAHVAKPPPNVESDLVFTHGDYCLPNVIFQILNNQAGETEAELRVVGFVDLGSAGVADRYVDLASAVWSLRFNGLEKHVPAFLQCYTARSELSGHKITINQDKLDWYINMFTLT
4GKH Chain:A ((19-272))----------NLDADLYGYRWARDNVGQSGATIYRLYGK--PNAPELFLKHGKGSVANDVTDEMVRLNWLTA-FMPLPTIKHFIR--TPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHS-IPVCNCPF----NSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLP-FSPDSVVTHGDFSLDNLIFD--E---------GKLIGCIDVGRVGIADRYQDLAILWNCLGE-FSPSLQKRLFQKYGI---D-----NPDMNKLQFHLMLDEFF


General information:
TITO was launched using:
RESULT:

Template: 4GKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1082 -28669 -26.50 -117.01
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -26.50
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.331

(partial model without unconserved sides chains):
PDB file : Tito_4GKH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gkh-query.scw
PDB file : Tito_Scwrl_4GKH.pdb: