Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVEDVRLGAELERLTEGATWCPVWHLQRPLSPTTATAAPPLP-SSTYLKMAPA---GTLAADVAVMQLLKSCDVPAPHVLHYAQGGEGQADFLLISALAGVHGATAEAL--SRPEALVRSFAGGLQSLHGQHSTALLRSAEDLGAKFDRRVAVRVARVERRLRVG---EVPGHAERLEAILAHVAKPPPNVESDLVFTHGDYCLPNVIFQILNNQAGETEAELRVVGFVDLGSAGVADRYVDLASAVWSLRFNGLEKHVPAFLQCYTARSELSGHKITINQDKLDWYINMFTLT
4GKI Chain:C ((13-272))----RPRLNSNLDADLYGYRWARDNVGQSGATIYRLYGK--PNAPELFLKHGKGSVANDVTDEMVRLNWLTA-FMPLPTIKHFIR--TPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHS-IPVCNCPF----NSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLP-FSPDSVVTHGDFSLDNLIFD--E---------GKLIGCIDVGRVGIADRYQDLAILWNCLGE-FSPSLQKRLFQKYGI---D-----NPDMNKLQFHLMLDEFF


General information:
TITO was launched using:
RESULT:

Template: 4GKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1050 -26470 -25.21 -105.46
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain C : 0.69

3D Compatibility (PKB) : -25.21
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_4GKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gki-query.scw
PDB file : Tito_Scwrl_4GKI.pdb: