Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKLLETTLLKQLKETHDDF-SIQNINSLHGGYLNHVFQINSNLKPTVLWLNE-NKDSPKLSRQLIAIAILKKYFYSLIPDVYTSNRS---SIGCYYIMSKLNGENLERTL-PYLTTEEQIHFFKSMGHLLGNIHLIGSKEKVGYLDNLQRIPWKDWLGKYINSLIQDLLSQESHHNNSKWLTVQNA-LINHLEFID-EPNNFSFLHGDYYPGNILYTE--DFISGLLDFEWSLYGDPLYDFRVMEVFI-FREFPYHKEFYNSYQQVRKLPSDFYKTILFYAKVYQLELISMAYSCFSKDHYFIKNMEPDLINWASKNK
3N4U Chain:A ((1-281))MRTYTFDQVEKAI-EQLYPDFTINTIEISGEGNDCIAYEINR-DFIFKFPKHSRGSTNLFNEVNILKR-IHNK-LPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINIS-GFKSNL---VLDFREKINEDNKKIKKLLSRELKG----PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPT--VLEKYRMKEKYWSFEKIIYGKE------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1194 16545 13.86 61.28
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 13.86
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_3N4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3n4u-query.scw
PDB file : Tito_Scwrl_3N4U.pdb: