Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHRINDFIITDETEIASLLAPFDSTLTILDFSLMKDSMSNSGYIVTTNSGKYFLKIYSKTT-D-KIETAALSYLKN-KINVPALLFYDGSKQ---RFPFAYAIMEFLDGVTFINHVRSNLKYPPEMAYEIGRICAMIHERSYAHDAL--LDGKLNLLQELPRTRDKILHL---L-------NGKP----SEYLRPETIDSLCGFIKENP-----DLFDSIEAKSVLCHGDLGYANIMISDG-KVSFIDFEFTYSGSIYHDIGHFFRRKDDDVEALINRHIYDAFAQGYNSVSASPLPSNWLTLAHLCDISAMLCLLTYDNVPTEWVEDIENDILCAIDEDSRL
2Q83 Chain:A ((21-296))-------------ELAENVLQGWDVQ-AEKIDVIQ----ALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFEL-TVKQ------DLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG-FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTG-VWDDETFNVMLNAYES--RAPLTEEQK------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 959 -27735 -28.92 -113.67
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -28.92
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: