Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAAPIPVAGWGDKDDPWECLGERSSGATVYRVGE-VPSFYVKTTPPRHPDDHRFNPTKEAERLRWLAAQGLPVPEVVALDANDELAWVVTRALPGRPAARHWKPEERWRVIDVVADVARTLHALPVAECPFERRLADLIHQASSSMALGALDLDDVDPSHEGWTAQQLWDELSKMTPPAEDDLVVCHGDFCLDNVLVDPETLTLAGILDVDRAGVSDRWMDLALALYNIGQDDVMGLRSAARRALPPAVRHH----RRPAQADLHPTAGRISLS
4H05 Chain:B ((12-262))------------YPGCEWVVVEDGASGAGVYRLRGGGRELFVKVAALG----AGVGLLGEAERLVWLAEVGIPVPRVVEGGGDERVAWLVTEAVPGRPASARWPREQRLDVAVALAGLARSLHALDWERCPFDRSLAVTVPQAARAVAEGSVDLEDLDEERKGWSGERLLAELER-TRPADEDLAVCHGDLCPDNVLLDPRTCEVTGLIDVGRVGRADRHSDLALVLRELAHEEDPWFGPECSAAFLREYGRGWDGAVSEEKL------AFYRL-


General information:
TITO was launched using:
RESULT:

Template: 4H05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1127 -8808 -7.82 -35.80
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -7.82
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_4H05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4h05-query.scw
PDB file : Tito_Scwrl_4H05.pdb: