Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAAMVPGRSESWERGEPGRPALYFCGSIRGGREDRTLYERIVSRLRRFGTVLTEHVAAAELGARGEEAAGGDRLIHEQDLEWLQQADVVVAEVTQPSLGVGYELGRAVAFNKRILCLFRPQSGRVLSAMIRGAADGSRFQVWDYEEGEVEALLDRYFEADPPGQVAASPDPTT
4P5D Chain:C ((3-142))--------------------RSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEA--------------


General information:
TITO was launched using:
RESULT:

Template: 4P5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 630 -95087 -150.93 -679.19
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.89

3D Compatibility (PKB) : -150.93
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_4P5D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4p5d-query.scw
PDB file : Tito_Scwrl_4P5D.pdb: