Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDTILDALKAAYKLDADNLIANRFGSGHIHKTYKVESSTQSFILQEFNDTVFKYPERISNNLGYLLDNFDPANIPFVLPLPIPNIDGGLFTELDGGLYRLFPFVNGVTRDDI----DYKEQASKAAEAFAHFVLVFLPTDSNKLQDTIQDFHHLGWRYSQFDAALKAPAIEIDEETREMIAYYETRKDLLEQY-----GIYRNKLPLRATHNDTKINNLIFSEDLKKVNAVIDLDTIMAGFVFYDFGDLARTVACTRDESSLDWGKIKIDMVKYEGLLEGFYTVLAGHVTEEELNSLSFGAEMMTLIMGLRFLTDHLQGNTYYQVDYVEQNLHRSKNQAELLTAFMEKREEIKTLETNLKRKFL
4OCU Chain:A ((47-370))------------------------YGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTL-KAQGKETLDI-VRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGF---DANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHAD---QYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAI---------


General information:
TITO was launched using:
RESULT:

Template: 4OCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1621 -23336 -14.40 -74.08
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -14.40
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_4OCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocu-query.scw
PDB file : Tito_Scwrl_4OCU.pdb: