Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVELTDPDLERLRRRLAPAHIEDLRPLTGGASSLTYAGQRLGDRVVVKMAPPGIQPTRNRDVLRQCRIIKALRATPVPVPDVLWADAGDPPEIPPLFVMSWIDGSSLEPLFDLDCACESEDIVAERFRSAAATMAQLHRIQPAA-IGLGSEPI------VGAEAEIDRWCRALE-TVDPTLAAGWIDLGKALRAAAPPPLPPAVVHGDFRLGNLRAVDGRITGVLDWEIWSVGDPRVDVGWFLINCDRQTYQRATPYAGATPSPAELVSIYCAAAGYRLPDLAWFQALACFKSAATWSLIVKHNRRRHRPDANVEAMAQVLPHLLSRACILLD
3W0R Chain:A ((9-229))------TSVEKFLIE-KFGSVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRH------FASAALPIPEVL--DIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA---LDELMLWAEDCPEVRHLVHADFGSANVLTDNGRITAVIDWSEAMFGDPLYEV----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 840 -54833 -65.28 -257.43
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -65.28
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_3W0R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0r-query.scw
PDB file : Tito_Scwrl_3W0R.pdb: