Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTARAEAGSALRRRFGTPDSRTSDELPNTTLDLLIGSSGGALLAEIVGERGGEVVGWSVRQVDHRPGVSVTVTYRCDVRWGDGLRRETLGASIGRPKHHDAPGVRTLDVDGQPAAVWMFPDDPGLPALRTALDPAAVGRLLGHHPVETTLRAYRPTRRAVVEATTPGG-RVFLKVLRPAKA--EALRRRHLLLTGAGVP-VPDVLDH-R--------GDGLLVLAPLAGTTLRDAVRTGG--LVPSPRELLDVLDRLPAELCDQPRRAAWSEN----ADYYATL---V---------GAALPAEADRAATLADRVLDRI---------AGLP-DDGPTHGDFYEAQLLLTGGRLTGVLDVDSAGPGRRADDLACLVAHLETLSLMPGWDGPRLRRLAREYAAAFAADLARRGTDPAELNARIAGVLLSLATGPHRVQEPDWQAQTAARLSAADAWLTPARHGSRGLRYGDPMGRIVFMCGPAGAGKSTYARRLEADGFVRLSIDAAAWAAGHREQPLAEPVRSRFEREVQERLVALAADGADVVVDLSFWSRRMRDTYRALLAPLGVVPETVYLATPRDVVLARVAARTGSHADDVVLDEATAALYSDHFEAPTADEGPLTVVTPSG
4PDY Chain:A ((51-286))----------------------------------------------------------------------------------------------------------------------------------------------------------------------KGRRYAAKRSSIAPAHCRIMVQCLRHAQEQGFTKFARFVTTSSNAPYVRHGDFTYYVTEWVSGQPANFGLPEHVAQTAYTLAQFHEATRSFRTDWK-----DDVFGLFQARWRDLRQMWLGADRKREKDAFDQLLLSMRDELHRDAAESLALFEDRDVIAYLEAERSSGGWCHLDVIPSNCLYTPQHQVVLIDFELARPAPRALDMAHLLRRSLERGNWD---GHLAYACFLHFDAVRN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 600 -17990 -29.98 -94.68
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -29.98
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.092

(partial model without unconserved sides chains):
PDB file : Tito_4PDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4pdy-query.scw
PDB file : Tito_Scwrl_4PDY.pdb: