Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGRALLNDTWAVVTTPRPIVDAVVRSVCGRAVERLVPLAGGGLNETYRAEFAGDVAVVVRIARRPTPWFIDEAHLMAQAAAAGVPTAQVLGLEHLDHDGEPLSFSIQQFLPGRSLEELS--GELPAFALERVVAEAGEILARVHSVVPDDQRGIQHELRLPDEHEVARVARIV-------------ATALGPAAAAV-----VERGANFLRQEVTTRTAPPISLVHGDFCPKNLLIHDGTVAGFIDWEFAGPASPAYDFAQWEVDAGEPLHDRVDLVRRGYARVADPGTADAGWTPAFAVDWSLEKLGWTNPAAPAQFRRCVDVIARYTVC----------------------------------------------------------------
2OLC Chain:A ((5-396))--------KTPLYETLNESSAVALAVKLGLT--LTCQEIGDGNLNYVFHIY---DRALIIKQAVPYWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAE---TLIHGDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDG---ADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1360 -41244 -30.33 -141.25
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -30.33
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: