Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------MAE-THTAIVFFAGDRAYKVKKAVDLGFVDYTDRQAR------RAACVREVALNRRFAPDVYLG-----VGEVVAPDAEVSEPLVVMRRMPAGRRLSALVRAGADV--------------DEVLRAVARRL-AAWHATAPRGRDVDEQGTRDALASRWEASFEQVRA--------TTEGGSGFDGVPEVQRLVRRYLAGREALFDS------RIEQRRVVDGHGDLLAEDIF-----CLDDGPRVLDCLEFDDHLRYVDGLDDAAFLAMDLEQLGAPAAAARFLARYGEYSGDPAPPSLWHHYVAYRAFVRAKVSLIQAEQGAPGVRSAARRLVSTTLRHLRTSAVGLTLVGGLPGSGKSTLSGALADRL------GVTLLSSDRLRKELAGIPPESPAPAAYEEGLYTPEWTARTYDILLDRAAALLSRGESVVLDATWSAAELRAAAGRVAERTCADLVALHCQVPDEVAA------ARLSTRSPGPSDADLGVADALAAREPPWPDAVVVDTSG-PLESAVSRALAAVRPWGTDQAPVFRRPSAEPDQDRGAGSSLP
1I2D Chain:A ((2-573))ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVCEDNRLADGNVFSMPITLDASQEVIDEKKLQAGSRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFGGDPEHPAIVYLNNTV---KEFYIGGKIEAVNKLNHYDY-------VALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGLTKPGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGE--DFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTDEYRPVDQVP------AGVKTLNISGTELRRRLRS-GAHIPE----------------------WFSYPEVVKILRESNP-----PRATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHE------------LSSELGFTREDRHTNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAG-SFFLVHVATPLEHCEQSDKRGIYAAARRGEIKGFT-GVDDPY---ETPEKADLVVDFSKQSVRSIVHEIILVLESQG-----FLERQ---------------


General information:
TITO was launched using:
RESULT:

Template: 1I2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2211 67547 30.55 161.59
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 30.55
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.301

(partial model without unconserved sides chains):
PDB file : Tito_1I2D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1i2d-query.scw
PDB file : Tito_Scwrl_1I2D.pdb: