Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLTDQSTRIRAGEELDAAVIDPYLKAHIPGLEGTPKISQFPGGASNLTYLIEYP-RQEFVLRRPPFGHKAKSAHDMGREYRILNQLN--AGFPYCPKAYLYCTDESVIGAEFYVMERVKGIILRAELPPELNL--DEQQTRSLCKSFIDKFVELHNVDYAACGLADLGRPDGYVQRQIAGWTDRYEKALTP--DAP-LWEPVKAWLKDKQPADHHKPGIVHNDYRFDNVILDPENPMQIIGVLDWELATLGDPLMDLGNTLAYWVEAGDPAPVQLTRRQPSHLPGMLTRREFADYYAERAGIPPIDNLDFYYTYGLFRLAGIVQQIYYRYYHGQTQDKRFAQFVQMNKLLEQMSLQAIERSRL
5UXD Chain:A ((4-255))--------------PEDLDALLDLAARHGLD-LDGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPD---VLERAAVEGRLLAMLAPHLDVA-VPDWRISTS-------ELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVR--SPAQVRGAWRQDLARVGAEFEIAPALRERWEAWLADDGCWPG-HSVLTHGELYPAHTLVED---ERITAVLDWTTAAVGDPAKDLMFHQVSAP--------------------SAIFEVALQAYAEGGGRP------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1011 -39115 -38.69 -160.31
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -38.69
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.290

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: