Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWEDEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYI-SDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRE----TIYNDLTDIEKDYIESFMERLNA-TTVFEGKKCLCHNDFSCNHLLLDG---NNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGN-----IDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD
3TDW Chain:A ((4-299))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCV--KVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPV-TNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC----GEL-FTRQVMAYRGEVDLDTHIRKVSLF----VTFDQVSYLLEGLRARDQDWISEGLELLEEDKAN-


General information:
TITO was launched using:
RESULT:

Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1259 -22718 -18.04 -80.56
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -18.04
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.303

(partial model without unconserved sides chains):
PDB file : Tito_3TDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3tdw-query.scw
PDB file : Tito_Scwrl_3TDW.pdb: