TITO

Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)

Input alignment information:

Query sequence

MTARAEAGSALRRRFGTPDSRTSDELPNTTLDLLIGSSGGALLAEIVGERGGEVVGWSVRQVDHRPGVSVTVTYRCDVRWGDGLRRETLGASIGRPKHHDAPGVRTLDVDGQPAAVWMFPDDPGLPALRTALDPAAVGRLLGHHPVETTLRAYRPTRRAVVEATTPG--GRVFLKVLRPAKAEALRRRHLLLTG--AGVPVPDVLDH---RGDGLLVLAPLAGTTLRDAVRT----G-GLVPSPRELLDVLDRLPAELCDQPR--RAAWSENADYYATLVGA----ALPAEADRAATLADRVLDRIAGLPDDGPTHGDFYEAQLLLTGGRLTGVLDVDSAGPGRRADDLACLVAHLETLSLMPGWDGPRLRRLAREYAAAFAADLARRGTDPAELNARIAGVLLSLATGPHRVQEPDWQAQTAARLSAADAWLTPARHGSRGLRYGDPMGRIVFMCGPAGAGKSTYARRLEADGFVRLSIDAAAWAAGHREQPLAEPVRSRFEREVQERLVALAADGADVVVDLSFWSRRMRDTYRALLAPLGVVPETVYLATPRDVVLARVAARTGSHADDVVLDEATAALYSDHFEAPTADEGPLTVVTPSG

4GKI Chain:C ((38-238))

------------------------------------------------------------------------------------------------------------------------------------------------------------GATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

General information:

TITO was launched using:	RESULT:
Template: 4GKI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output	Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 622 -2365 -3.80 -12.92 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain C : 0.57 3D Compatibility (PKB) : -3.80 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.57 QMean score : 0.128

(partial model without unconserved sides chains):
PDB file : Tito_4GKI.pdb:

(Unconserved sides chains are recalculated) :
Sequence: align-4gki-query.scw
PDB file : Tito_Scwrl_4GKI.pdb: