Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGISNTNPPGGAPRPRQQCFLSADLGPDVMGQPTLLEATPFVNDMFDFHGYRCQMGKDCSHVRCRGFPAAFKMTAR-------------------
1B8G Chain:A ((1-428))MLSRNATSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGL-------FCWVDM-RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH---CTE-PGWFRVCFANLPERTLDLAMQRLKAFVG


General information:
TITO was launched using:
RESULT:

Template: 1B8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 58 -928 -16.00 -14.50
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -16.00
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_1B8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1b8g-query.scw
PDB file : Tito_Scwrl_1B8G.pdb: