Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------------------------------------------------------------------------EQDCYYTVWTSNGNSWLRSIRDKTRSD----HTLGIHGASVYFDEDCYPHYHSKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5AEX Chain:A ((2-457))SYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRS


General information:
TITO was launched using:
RESULT:

Template: 5AEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 62 -3942 -63.58 -77.29
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.41

3D Compatibility (PKB) : -63.58
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.41
QMean score : -0.027

(partial model without unconserved sides chains):
PDB file : Tito_5AEX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5aex-query.scw
PDB file : Tito_Scwrl_5AEX.pdb: