Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD
5SZH Chain:A ((1-148))--------------------------------------------------------------------------------------------------------GHMKQEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALRGEQD----EAQLLQEWFKLVLEKNKLMRYESELLIMAQELELEDHQSRLEQKLREKMLKEESQK----DEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAED------------------


General information:
TITO was launched using:
RESULT:

Template: 5SZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 225 21186 94.16 148.15
target 2D structure prediction score : 0.90
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 94.16
2D Compatibility (Sec. Struct. Predict.) : 0.90
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_5SZH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5szh-query.scw
PDB file : Tito_Scwrl_5SZH.pdb: