Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MTSPHFSSY-DEGPLDVSMAATNLENQLHSAQKNLLFLQREHASTLKGLHSEIRRLQQHCTDLTYELTVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKEREK-----KYLEELKAKSHKLTLLSSELEQRASTIAYLTSQLHAAKKKLMSSSGTSDASPSGSPV--------LASYKPAPPKDKLPETPRRRMKKSLSAPLHPEFE-EVYRFGAESRKLLLREPVDAMPDP------TPFLLARESAEVHLIKERPLVIPPIASDRSGEQHSPAREKPHKAHVGVAHRIHHATPPQAQPEVKTLAVDQVNGGKVVRKHSGTDRTV-------------------------------------------------------------------------------------------------------
4RP9 Chain:A ((6-456))NIFTVFFNQVMTNAPLLLGIVTCLGYILLR---KSVSVIIKGTIKTIIGFM-LLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATID-RMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDA


General information:
TITO was launched using:
RESULT:

Template: 4RP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1423 -30644 -21.53 -94.00
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -21.53
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.113

(partial model without unconserved sides chains):
PDB file : Tito_4RP9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4rp9-query.scw
PDB file : Tito_Scwrl_4RP9.pdb: