@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : ERH_HUMAN: (2018-07-13 )
MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQAGK
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20.........30........40.--.......50........60...---------------.....70........80.......--.90...----------.....100..--------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
S
H
T
I
L
L
VQPTKRPEGRTYA-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R--MNPNSP
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
RADTQTYQPY
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
QAGK--------------------------------------------------------------------------------------------------------------
21
Fugue
89.64
100%
-202
- C1 -
-
1W9G
-
ERH_HUMAN
A:
[1-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
A
----------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
89.44
100%
-202
- C1 -
-
1W9G
-
ERH_HUMAN
A:
[1-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
A
----------------------------------------------------------------------------------------------------------------
31
HHSearch
89.18
100%
-198
- C1 -
-
2NML
-
ERH_HUMAN
A:
[2-101]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
-----------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
89.18
100%
-198
- C1 -
-
2NML
-
ERH_HUMAN
A:
[2-101]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
-----------------------------------------------------------------------------------------------------------------
32
HHSearch
83.83
100%
-156
- C1 -
-
1WWQ
-
ERH_MOUSE
A:
[8-111]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
A
G
K
--------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
83.65
100%
-156
- C1 -
-
1WWQ
-
ERH_MOUSE
A:
[8-111]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
Q
A
G
K
--------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
82.23
97%
-195
- C1 -
-
1WZ7
-
ERH_MOUSE
A:
[2-100]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
H
T
I
L
L
V
Q
P
T
K
R
P
E
G
R
T
Y
A
-
D
Y
E
S
V
N
E
C
M
E
G
V
C
K
M
Y
E
E
H
L
K
R
--
M
N
P
N
S
P
S
I
T
Y
D
I
S
Q
L
F
D
F
I
D
D
L
---------------
A
D
L
S
C
L
V
Y
R
A
D
T
Q
T
Y
Q
P
Y
N
K
D
W
I
K
--
E
K
I
Y
V
L
----------
L
R
R
Q
A
Q
------------------------------------------------------------------------------------------------------------------
40
HHSearch
39.47
50%
-440
- C1 -
-
2K6S
-
RFIP2_HUMAN
A:
[25-36]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
I
R
E
L
E
D
Y
I
D
N
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
HHSearch
38.79
24%
-417
* C1 *
-
3DNO
-
?
D:
[101-117]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
Q
M
H
E
D
I
I
S
L
W
D
Q
S
L
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
38.77
16%
-17
- C1 -
-
5L9W
2
APCC_AROAE
B:
[8-718]
D
A
I
N
S
I
D
I
D
V
G
GT
F
T
D
F
V
L
TLDG
E
R
H
I
A
K
C
P
T
T
PHD
L
S
I
G
F
L
N
A
V
E
A
G
G
D
K
V
GLSVEELLPRID
I
I
R
Y
S
T
T
V
A
L
N
R
L
L
Q
RQGPR
I
G
L
L
T
TEGHEDAILIGRGAQWTDGQRVAERRNIAVQNKPLPLIERDL
I
L
G
V
R
E
R
I
D
SSGSVVRPLD
E
E
D
V
R
T
K
L
R
M
L
M
D
R
GAR
A
I
V
V
S
L
L
WSFMNP
A
H
E
K
R
V
R
E
I
I
R
E
E
YKEYHIG
F
V
P
V
V
M
SHSVVSKIG
E
Y
E
R
T
M
T
A
V
L
D
A
Y
L
Q
R
S
M
Q
N
D
I
G
A
T
W
D
K
L
R
A
K
G
Y
H
G
A
F
L
M
I
H
NSGGSADIFKTPASRTFN
G
G
P
V
A
G
L
M
G
S
A
Y
F
A
N
K
L
GYK
N
V
V
A
G
D
V
G
GT
S
F
D
V
A
L
V
V
ESSVRNYTF
R
P
V
I
DKWMVNVTMM
Q
T
I
S
V
G
SGGG
S
I
A
K
V
D
RSGTRLEVGPRSAGSMPGPVCYDLGGTEPT
V
T
D
A
D
V
V
L
GYINPDTYYGG
R
M
P
L
N
K
A
K
A
E
K
A
I
R
E
K
IAQPLGIE
T
I
E
A
A
A
L
I
R
Y
I
V
D
E
N
M
A
S
A
I
K
R
E
V
H
M
R
GYHPED
F
V
L
F
A
F
G
GAGPTHMAGLKGDIP
K
A
V
V
F
PA
A
P
V
F
C
A
M
G
S
S
I
M
D
I
V
H
M
Y
E
Q
S
R
R
M
V
F
M
E
P
---
G
T
E
K
F
V
V
-
D
Y
E
H
F
N
Q
T
V
D
T
M
I
E
R
A
R
Q
E
L
R
S
E
G
L
E
V
D
D
A
S
F
G
L
E
L
D
M
L
Y
G
G
Q
V
N
L
---------------
K
R
M
S
S
P
L
L
H
I
R
T
--------
A
E
D
A
--
L
K
V
Y
Q
A
----------
F
E
T
E
F
S
E
A
F
S
PLVVNKPG
G
V
F
L
D
N
F
V
L
R
V
T
V
P
T
W
KPPI
P
E
Y
P
LQGTDPSAAFL
G
K
R
K
A
Y
W
PETKHWAD
T
P
T
Y
Q
FELLQAG
N
V
I
D
G
P
A
I
V
E
A
EL
T
T
I
V
V
P
P
R
Q
R
L
S
I
D
THG
L
A
I
L
E
A
IDPA
22
Fugue
35.04
18%
-119
- C1 -
-
1T1J
-
?
A:
[0-118]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
M
R
K
I
F
L
A
C
P
Y
S
H
A
D
-----------
A
E
V
V
E
Q
R
F
R
A
C
N
E
V
A
A
T
--
I
V
R
A
G
H
V
V
F
S
Q
V
S
M
S
H
P
I
N
L
C
L
---------------
A
E
L
D
---
R
A
A
I
G
R
L
W
A
P
V
D
A
F
Y
M
D
H
L
E
E
L
I
V
L
DLPGWRDS
A
G
I
R
R
E
M
E
F
F
E
A
G
G
Q
R
V
S
L
WSEVEHEFR----------------------------------------------------------------------------------------------
15
PsiBlast_PDB
34.41
23%
-9
- C1 -
-
5BNY
-
?
B:
[27-134]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
N
S
Q
G
S
G
Y
A
A
D
K
E
S
T
Q
K
A
I
D
G
I
T
N
K
V
N
S
I
I
D
K
--
M
N
T
Q
F
E
A
V
G
H
E
F
S
N
L
E
R
R
I
D
N
L
N
K
R
M
E
D
G
F
L
D
V
W
T
Y
N
A
E
L
L
V
L
L
E
N
E
R
T
L
D
L
H
D
A
N
V
K
N
L
H
--
E
K
V
R
S
Q
----------
L
R
D
N
A
N
D
L
G
---------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
33.54
23%
8
- C1 -
-
5BQZ
-
?
B:
[27-134]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
N
S
Q
G
S
G
Y
A
A
D
K
E
S
T
Q
K
A
I
D
G
I
T
N
K
V
N
S
I
I
D
K
--
M
N
T
Q
F
E
A
V
G
H
E
F
S
N
L
E
R
R
I
D
N
L
N
K
R
M
E
D
G
F
L
D
V
W
T
Y
N
A
E
L
L
V
L
L
E
N
E
R
T
L
D
L
H
D
A
N
V
K
N
L
H
--
E
K
V
R
S
Q
----------
L
R
D
N
A
N
D
L
G
---------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
33.48
23%
0
- C1 -
-
5BQY
-
?
B:
[27-134]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
N
S
Q
G
S
G
Y
A
A
D
K
E
S
T
Q
K
A
I
D
G
I
T
N
K
V
N
S
I
I
D
K
--
M
N
T
Q
F
E
A
V
G
H
E
F
S
N
L
E
R
R
I
D
N
L
N
K
R
M
E
D
G
F
L
D
V
W
T
Y
N
A
E
L
L
V
L
L
E
N
E
R
T
L
D
L
H
D
A
N
V
K
N
L
H
--
E
K
V
R
S
Q
----------
L
R
D
N
A
N
D
L
G
---------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
33.11
32%
-123
- C1 -
-
2X6H
-
?
A:
[579-639]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
K
M
F
L
K
V
L
E
N
--
G
N
F
N
L
R
G
I
F
Y
N
L
R
K
Q
R
R
F
I
D
E
L
---------------
V
K
L
V
K
L
V
A
K
------
E
P
G
N
R
N
K
K
T
--
E
K
F
Q
K
L
----------
L
A
E
Q
--------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
32.59
32%
-128
- C1 -
-
2X6I
-
?
A:
[326-386]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
K
M
F
L
K
V
L
E
N
--
G
N
F
N
L
R
G
I
F
Y
N
L
R
K
Q
R
R
F
I
D
E
L
---------------
V
K
L
V
K
L
V
A
K
------
E
P
G
N
R
N
K
K
T
--
E
K
F
Q
K
L
----------
L
A
E
Q
--------------------------------------------------------------------------------------------------------------------
25
Fugue
32.39
18%
-47
* C2 *
-
1PU1
-
Y677_METTH
A:
[1-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
L
R
K
L
-----------
T
E
G
-
D
L
D
E
I
S
S
F
L
H
---
N
T
I
S
D
F
I
L
K
--
R
V
S
A
K
E
I
V
D
I
D
I
T
V
L
V
E
Y
T
D
E
L
K
--------------
V
D
I
S
A
E
L
Y
L
D
E
L
S
D
A
D
P
G
I
V
D
E
A
V
--
D
A
A
Y
R
S
----------
L
E
S
F
L
D
G
F
R
E
--------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
32.01
32%
-124
- C1 -
-
2X6K
-
?
A:
[326-386]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
K
M
F
L
K
V
L
E
N
--
G
N
F
N
L
R
G
I
F
Y
N
L
R
K
Q
R
R
F
I
D
E
L
---------------
V
K
L
V
K
L
V
A
K
------
E
P
G
N
R
N
K
K
T
--
E
K
F
Q
K
L
----------
L
A
E
Q
--------------------------------------------------------------------------------------------------------------------
43
HHSearch
31.11
22%
-143
- C1 -
-
1UJ8
-
ISCX_ECOLI
A:
[12-52]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
L
K
W
T
-
D
S
R
E
I
G
E
A
L
-----------
Y
D
--
A
Y
P
D
L
D
P
K
T
V
R
F
T
D
M
H
Q
W
I
C
D
L
---------------
E
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
30.92
32%
-109
- C1 -
-
2X6J
-
?
A:
[326-386]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
L
K
M
F
L
K
V
L
E
N
--
G
N
F
N
L
R
G
I
F
Y
N
L
R
K
Q
R
R
F
I
D
E
L
---------------
V
K
L
V
K
L
V
A
K
------
E
P
G
N
R
N
K
K
T
--
E
K
F
Q
K
L
----------
L
A
E
Q
--------------------------------------------------------------------------------------------------------------------