@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00081821: (2018-03-20 )
GGRKPEPWTAEQKANMIALSRSTLSRPRCNIIIYGLPSGRNQDRPVMGEADTALNSEVFITVRSGEKYRCTVKDDCDKPTCHELPPHLTYAGTDMHAIPLVTLRSLGVEIN
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-----.----------....--------10....---.-.-..20..----.----......30..------------...---------------------------...------40...-...-..-------50.-.....--------..60..---..---...---.-----70..-....--------..----------80..-...------...---------90.-.------......100----...---....110
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGRK-----P----------EPW
T
--------
A
E
QKA
N
---
M
-
I
-
A
L
S-RS----T----LSRPR
C
N
I
I
I
------------
Y
GL---------------------------PSG------RNQDR-PVM-GE-------ADT-ALN
S
E
--------
V
F
I
T
VR---SG---
E
K
Y
---
R
-----
C
T
VK-DDCD--------KP----------
T
C
HE-LPP------H
L
T
---------YAG-T------DM
H
A
I
P
L
V
T
----
L
R
S
---LGVEIN
35
Fugue
89.14
22%
-
- C5 -
-
4KNC
-
ALGX_PSEAE
A:
[41-463]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNLCPAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTY
D
L
R
T
-----
D
----------
F
G
T
S
--------
A
E
G
W
R
E
---
L
-
R
-
A
L
--
R
D
----
E
----
L
K
R
K
G
I
E
L
V
V
------------
V
Y
Q
---------------------------
P
T
R
------
G
L
V
N
R
-
E
K
L
-
S
P
-------
A
E
K
-
A
G
------------
F
D
Y
E
L
---
A
K
---
K
N
Y
---
L
-----
A
T
I
A
-
R
F
R
Q
AGIWTPDF
S
P
----------
L
F
D
E
-
K
E
E
------
H
A
Y
---------
Y
F
K
-
G
------
D
H
H
W
T
P
H
G
A
----
R
R
S
---
A
K
I
V
A
E
33
Fugue
59.54
22%
58
- C7 -
-
5FZP
6
DAIP_STRMB
A:
[2-345]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSTSGWRAPSCTKVTGDGAVTFTTDDGATLAPTTGTLQSVSYTHGLVALDTPNTLLATHNDELQRSTDAGCTWTKVATLGSGSTWLTAATGGRAFAWEKNGGYLARVDGRTVTKLSSPSADIVGVGTDKARRDHVRLAGSDGQLYDSTDAGATWKPLGKLAFGPGASVYTVSFDPADLDHAVAGGMTTGGAVTTD
G
G
A
T
------------------
W
T
AATGLSAT
A
G
G
K
S
N
---
L
-
F
-
A
A
S
-
V
S
----
P
----
A
D
R
N
----
V
V
------------
Y
A
L
---------------------------
G
I
D
------
L
V
E
A
A
-
P
N
S
-
G
A
-------
E
G
-----
R
H
--------
L
Y
R
S
T
D
---
G
G
---
R
T
Y
---
T
-----
R
I
V
D
-
D
T
P
D
--------
T
E
----------
L
T
N
S
-
T
L
L
------
A
P
S
---------
P
V
D
-
P
------
N
V
L
Y
F
E
Y
G
T
Y---
F
Q
A
---
Y
G
T
D
L
Y
32
Fugue
58.55
22%
-132
* C6 *
-
2MYW
-
?
A:
[7-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
R
E
-----
N
----------
L
Y
F
Q
--------
G
H
M
A
A
P
---
A
---------------------
R
F
C
V
Y
Y
D
------------
G
H
L
---------------------------
P
A
T
------
R
V
L
L
M
-
Y
V
R
---------------
I
G
T
T
--------
A
T
I
T
A
R
----
G
---
H
E
F
---
E
-----
V
E
A
K
-
D
------------
Q
----------
N
C
K
V
-
I
L
T
------
N
G
K
---------
Q
A
P
-
D
------
W
L
A
A
E
P
Y
------------------
38
Fugue
53.70
20%
-37
- C7 -
-
1YQ5
-
P5_BPPRD
A:
[197-340]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGVTDALSLMYSTST
G
G
P
A
-----
S
----------
I
A
A
N
--------
A
L
T
D
F
D
---
L
-
S
G
A
L
T
-
V
N
----
S
VGTG
L
T
K
S
A
A
G
I
Q
L
------------
A
A
G
---------------------------
K
S
G
------
L
Y
Q
I
T
M
T
V
K
----------
N
N
T
-
V
T
T
G
N
--------
Y
L
L
R
V
K
---
Y
G
---
S
-
S
---
D
-----
F
V
V
A
-
C
P
A
S
--------
S
L
----------
T
A
G
G
-
T
I
S
------
L
L
I
---------
Y
C
N
-
V
LGVVSL
D
V
L
K
F
S
L
C
N
DGAA
L
S
N
---
Y
I
I
N
I
T
31
Fugue
51.88
18%
-106
- C6 -
-
2MM2
-
?
A:
[1-65]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
N
I
------------
L
---------------------------------------
N
I
N
E
-
V
V
I
-
A
T
-------
G
C
V
-
P
A
G
G
N
--------
L
I
I
R
V
G
---
S
D
---
H
S
Y
---
L
-----
I
R
A
T
-
V
S
C
G
--------
L
S
----------
L
N
P
S
-
Q
S
F
INGE--
S
L
A
---------
S
G
G
-
R
------
C
------------------------
39
Fugue
50.33
19%
33
- C5 -
-
4R12
3
?
A:
[15-587]
YTTLYSSYPCTKIMTSDGQFGCSSKHGGNSGILYLIDDDESYNNYFSYSQQKDIIVVLDTNYFNSTSVLNLHNKSKIEGIIVLTDTKKTYPYSPDSRYPNKIYGLYPNSNLEWNPNADGFTYFSFPFPIFAIDNQTSVAIRNVSKHNRDGQYPAWGAELDSFMQGAINSETCLRRGFCEPVGGQSIWSSFSSKIDKEKEIILVMLPFDTTAFFRDLSIGADQSSFATVTLLSVIKSLAAVDRSSWNKEVVFAFWNAERWGYVGSEYFINDLLNFQCKTYNSDKSKCIDPPRADLAFQTQINFTKISTIIELNQIGRAQLDKNLGKYSLYLHTAGTKTSSVTDILDQVASSYENSTITFKPTTQTELPPSSSMSFLKKTNKIPVVVITDHDYKYSNPYYGYEQDDNENVLGSTLNDIVYILSTFIDRIAGGNNNITIDKNFINILYPCFTSSITCFNIL
M
K
T
Y
-----
P
----------
L
N
E
V
--------
P
N
F
Y
S
S
---
V
-
F
-
G
T
S
-
L
T
----
T
----
T
L
S
P
----------------------------------------------------------------------------
Y
E
T
-
K
L
I
H
R
--------
L
L
Y
S
I
T
---
Q
Y
---
N
S
T
---
L
TN---
C
T
S
D
-
N
D
C
P
--------
S
S
----------
L
C
Y
---
S
G
------
Q
C
V
---------
S
S
N
-
T
------
H
L
H
N
A
L
---------
S
---
L
G
F
D
F
D
49
SP3
48.47
23%
46
- C5 -
-
1K30
-
PLSB_CUCMO
A:
[3-368]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICV
Y
S
K
K
HMFDI
P
----------
E
L
T
E
--------
T
K
R
K
A
N
---
T
-
R
-
S
L
K
-
E
M
----
A
----
L
L
L
R
G
G
S
Q
L
I
------------
W
I
A
---------------------------
P
S
G
G-----
R
D
R
P
D
-
P
S
T
-
G
E
WYPAPFD
A
S
S
-
V
D
N
M
R
--------
R
L
I
Q
-
H
---
S
D
VPG
H
L
F
---
P
-----
L
A
L
L
--------------------------
C
H
D
I
M
P
P
------
P
S
Q
VEIEIRVIA
F
N
G
-
A
------
G
L
S
V
A
P
E
I
S
----
F
E
E
---
I
A
A
T
H
K
34
Fugue
48.03
10%
-116
* C5 *
-
1F3C
-
DYL1_RAT
A:
[1-89]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
--------
C
D
R
K
A
V
---
I
-
K
-
N
A
D
-
M
S
----
E
----
E
M
Q
Q
D
S
V
E
C
A
------------
T
Q
A
---------------------------
L
E
K
------
Y
N
I
E
K
-
D
I
A
-
A
H
-------
I
K
K
-
E
F
D
K
K
-----------------
Y
N
---
P
T
W
---
H
-----
C
I
V
G
-
R
N
F
G
--------
S
Y
----------
V
T
H
E
-
T
K
H
------
F
I
Y
---------
F
Y
----------
L
G
Q
V
A
I
L
L
----
F
K
S
---
G
-----
23
HHSearch
47.26
18%
-122
- C6 -
-
2MM0
-
?
A:
[2-58]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
V
A
N
I
------------
L
N
---------------------------------------
I
N
E
-
A
V
I
-
A
T
-------
G
C
V
-
P
A
G
G
E
--------
L
R
I
F
V
G
---
S
S
---
H
S
Y
---
L
-----
I
K
A
T
-
S
S
C
G
--------
L
S
L---------
T
N
Q
V
-
F
I
N
------
G
E
S
---------
V
-----------------------------------
45
SP3
43.80
19%
1
- C2 -
-
1RNI
-
?
A:
[1-210]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSERIRYAKWFLEHGFNIIPIDP
E
S
K
K
-----
P
VLKEWQKYSH
E
M
P
S
--------
D
E
E
K
Q
R
---
F
-
L
-
K
M
I
-
E
E
GYNY
A
----
I
P
G
G
Q
K
G
L
V
I
------------
L
D
F
ESKEKLKAWIGESALEELCRKTLCTNT
V
H
G
GIHIYV
L
S
N
D
I
-
P
P
H
-
K
I
-------
N
P
L
F
E
E
N
G
K
--------
G
I
I
D
L
Q
---
S
Y
---
N
S
Y
---
V
LGLGS
C
V
N
H
-
L
H
C
T
--------
T
D
KCPWKEQNYT
T
C
Y
T
-
L
Y
N
------
E
L
K
---------
E
I
S
K
V
------
D
L
K
S
L
L
R
F
L
----
A
E
K
GKR
L
G
I
T
L
S
41
SP3
42.57
10%
39
- C7 -
-
1I4F
1
B2MG_HUMAN
B:
[1-100]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIQRTPKIQV
Y
S
R
H
-----
P
----------
A
E
N
-----------
G
K
S
N
---
F
-
L
-
N
C
Y
-
V
S
----
G
----
F
H
P
S
D
I
E
V
D
L
------------
L
K
-----------------------------
N
G
--------
E
R
I
-
E
K
V
-
E
H
-------
S
D
L
-
S
F
S
K
D
WSFYLLYY
T
E
F
T
P
T
---
E
K
---
D
E
Y
---
A
-----
C
R
V
N
H
V
T
L
S
--------
Q
P
----------
K
I
V
K
-
W
D
R
------
D
M
----------------------------------------------
40
SP3
42.57
10%
39
* C7 *
-
1I4F
1
B2MG_HUMAN
B:
[1-100]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIQRTPKIQV
Y
S
R
H
-----
P
----------
A
E
N
-----------
G
K
S
N
---
F
-
L
-
N
C
Y
-
V
S
----
G
----
F
H
P
S
D
I
E
V
D
L
------------
L
K
-----------------------------
N
G
--------
E
R
I
-
E
K
V
-
E
H
-------
S
D
L
-
S
F
S
K
D
WSFYLLYY
T
E
F
T
P
T
---
E
K
---
D
E
Y
---
A
-----
C
R
V
N
H
V
T
L
S
--------
Q
P
----------
K
I
V
K
-
W
D
R
------
D
M
----------------------------------------------
44
SP3
39.59
17%
47
- C5 -
-
1RP3
-
?
A:
[0-234]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMKNPYSNQIEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEK
L
G
R
E
-----
P
-------------
T
--------
D
E
E
V
A
K
ELG
I
S
T
-
E
E
L
-
F
K
----
T
----
L
D
K
I
N
F
S
Y
I
L
------------
S
L
E
---------------------------
E
V
F
------
R
D
F
A
R
-
D
Y
S
-
E
L
-------
I
P
S
-
S
T
N
V
E
-----------
E
E
V
---
I
K
---
R
E
L
---
T
-----
E
K
V
K
-
E
A
V
S
--------
K
----------------
L
P
E
REKLVI
Q
L
I
---------
F
-
Y
-
E
------
E
L
------
P
----
A
K
E
---
V
A
K
I
L
E
1
PsiBlast_PDB
39.05
32%
63
- C6 -
-
5JOZ
-
GH43B_BACO1
A:
[379-431]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
---------------------------
P
K
V
------
E
N
E
E
A
-
G
L
V
-
V
R
-------
A
D
D
-
K
N
H
Y
D
--------
L
L
I
T
E
R
---
N
G
---
Q
R
V
AMI
R
-----
K
T
L
K
-
D
K
V
V
--------
D
T
----------
T
C
K
E
-
L
P
-------------------------------------------------------
4
PsiBlast_PDB
38.33
40%
-53
- C10 -
-
5LJZ
-
A:
[391-415]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
---
S
T
F
---
R
-----
C
C
H
G
-
E
D
C
S
--------
Q
I
----------
G
L
H
A
-
A
A
P
------
H
L
----------------------------------------------
36
Fugue
38.24
12%
33
- C3 -
-
4IT6
7
?
A:
[6-122]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
W
Y
V
-----
G
----------
T
E
W
E
DKNRGL--
A
K
K
V
I
G
---
L
-
Q
-
F
T
E
M
D
K
----
P
----
T
I
I
S
T
V
E
F
S
V
NKKATNLGGRPS
K
Y
L
---------------------------
V
A
T
------
Y
P
Q
K
H
-
S
L
E
M
G
T
-------
S
L
T
-
A
V
D
C
Y
--------
L
E
L
L
L
Q
QFV
P
G
---
E
T
A
---
A
-----
C
S
I
T
-
T
K
T
G
--------------------------------------------------------------
E
R
I
E
----
F
E
L
---
K
L
E
K
I
V
6
PsiBlast_PDB
37.62
40%
-33
- C10 -
-
5LK1
-
A:
[391-415]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
---
S
T
F
---
R
-----
C
C
H
G
-
E
D
C
S
--------
Q
I
----------
G
L
H
A
-
A
A
P
------
H
L
----------------------------------------------
8
PsiBlast_PDB
37.29
40%
-15
- C10 -
-
5LK3
-
A:
[391-415]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
---
S
T
F
---
R
-----
C
C
H
G
-
E
D
C
S
--------
Q
I
----------
G
L
H
A
-
A
A
P
------
H
L
----------------------------------------------
3
PsiBlast_PDB
37.18
40%
-9
- C10 -
-
5LJX
-
A:
[391-415]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
---
S
T
F
---
R
-----
C
C
H
G
-
E
D
C
S
--------
Q
I
----------
G
L
H
A
-
A
A
P
------
H
L
----------------------------------------------
5
PsiBlast_PDB
36.91
40%
-17
- C10 -
-
5LK0
-
A:
[391-415]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
---
S
T
F
---
R
-----
C
C
H
G
-
E
D
C
S
--------
Q
I
----------
G
L
H
A
-
A
A
P
------
H
L
----------------------------------------------