@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3TYX6: (2017-12-15 )
MKNASLFSLSISKDSSFLLECQMIGREEKGNFDKKEEVSDFPVNKNRVGKKKRFEEVYGSIFRNLGTKKAPRQCFFEKLMTD
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10...--.....20..-......30........40.--.......50........-60.........70........80.-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------MKNA
S
L
F
S
L
S
ISKD--S
S
F
L
L
E
C
Q
M-IGREEKGNFD
K
K
E
EVSDFP--VNKNRVG
K
K
K
R
F
E
E
V
Y
G
-
S
-
I
F
R
N
LGTKK
A
P
R
Q
C
F
F
E
K
LMTD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
72.89
27%
-21
- C4 -
-
2XJB
-
5NTC_HUMAN
A:
[25-89]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
71.83
27%
-11
- C4 -
-
2XJC
2
5NTC_HUMAN
A:
[25-90]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
71.74
27%
-17
- C4 -
-
2XCX
-
5NTC_HUMAN
A:
[25-86]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
71.69
27%
-14
- C4 -
-
2XCV
-
5NTC_HUMAN
A:
[25-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
71.40
27%
-10
- C4 -
-
5L50
1
5NTC_HUMAN
A:
[26-82]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
71.06
27%
2
- C4 -
-
2XJE
-
5NTC_HUMAN
A:
[26-89]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
70.88
27%
-9
- C4 -
-
2XJF
-
5NTC_HUMAN
A:
[26-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
70.41
27%
-2
- C4 -
-
5K7Y
1
5NTC_HUMAN
A:
[26-82]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
69.72
27%
1
- C4 -
-
2XCW
-
5NTC_HUMAN
A:
[25-83]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
69.45
27%
-1
- C4 -
-
2JC9
1
5NTC_HUMAN
A:
[26-87]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
68.96
27%
6
- C4 -
-
2XJD
-
5NTC_HUMAN
A:
[25-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
68.94
27%
0
- C4 -
-
2J2C
-
5NTC_HUMAN
A:
[26-84]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
68.45
49%
-
- C- -
-
3A57
-
HLY2_VIBPA
A:
[30-65]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
N
V
E
V
S
D
F
W
--
T
N
R
N
--
V
K
R
K
P
Y
K
D
V
Y
G
Q
S
-
V
F
T
T
S
G
T
K
W
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
67.99
27%
8
- C4 -
-
4H4B
-
5NTC_HUMAN
A:
[26-86]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
67.40
27%
7
- C4 -
-
2JCM
-
5NTC_HUMAN
A:
[26-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
66.19
27%
26
- C4 -
-
5L4Z
4
5NTC_HUMAN
A:
[26-84]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
L
Q
N
A
A
D
M
P
--
A
N
M
D
K
H
A
L
K
K
Y
R
R
E
A
Y
H
-
R
-
V
F
V
N
R
S
L
A
M
E
K
I
K
C
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
63.25
21%
16
- C2 -
-
5FLG
2
BIOW_BACSU
A:
[5-259]
E
E
T
F
Y
S
V
R
M
R
A
S
M
NGSDGGKHI
S
G
G
E
R
L
I
P
FHE
M
K
H
T
V
N
A
L
L
E
K
G
L
S
HSRGKPD
F
M
Q
I
Q
F
E
E
V
H
E
S
I
K
T
I
Q
P
L
P
V
H
T
N
E
V
SC
P
E
E
G
Q
K
L
A
R
L
L
L
E
K
E
GVS
R
D
V
I
E
K
A
Y
E
Q
I
PEWSDVR
G
A
V
L
F
D
IHTGKRMDQTKEK
G
V
R
V
S
RMDWP
D
A
N
F
E
K
W
A
L
H
S
HVPAH
S
R
I
K
E
A
L
A
L
A
S
K
V
S
R
H
--
P
A
V
V
A
E
L
C
W
----------------
S
D
D
P
DY
I
T
G
Y
V
A
G
K
K
M
G
Y
Q
R
I
T
A
----
M
K
E
Y
G
T
E
E
G
C
R
V
F
F
I
D
G
S
N
D
V
N
T
Y
I
H
D
L
E
K
Q
P
I
L
I
E
W
E
EDHD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
61.69
21%
47
- C3 -
-
4C1N
2
?
A:
[1-442]
-------------------------------------------------------------------------------------------------------------------------------------------------GLT
G
L
E
I
Y
K
H
LPKKNCKECG
Q
P
T
C
L
A
F
A
M
Q
I
A
A
G
--
K
A
G
L
D
A
C
P
Y
-
V
S
D
E
A
K
E
L
L
E
S
A
---
S
A
P
P
--
V
A
L
I
K
V
G
K
G
E
K
V
L
E
I
G
H
-
E
-
T
V
L
F
R
H
D
K
R
F
E
H
P
C
G
L
A
I
L
V
E
D
TLS
E
G
E
I
K
E
R
V
E
K
I
N
K
L
V
F
D
R
VGQMHSVN
L
V
A
L
K
GSSQD
A
A
T
F
A
K
A
V
A
T
A
R
E
V
TD
L
P
F
I
L
I
G
T
P
E
Q
L
A
A
A
L
E
TEGANNPLLYAATADN
Y
E
Q
M
V
E
L
A
K
K
YN
V
P
L
T
V
S
A
K
G
L
D
A
L
A
E
L
V
Q
K
I
T
A
L
GYKN
L
I
L
D
PQPEN
I
S
E
G
L
F
Y
Q
T
Q
I
R
R
L
A
I
KKLFRPFG
Y
P
T
I
A
F
ALDEN
P
Y
Q
A
V
M
E
A
S
V
Y
I
A
K
YAG
I
I
V
L
NTVE
P
A
D
I
L
P
L
I
T
L
R
L
N
I
Y
TDPQKPIAVEP
K
V
Y
E
I
LNPGPD
A
P
V
F
I
T
T
NF
S
L
T
Y
F
C
V
A
G
D
V
E
G
A
R
I
P
A
Y
I
L
PVDTDGTS
V
L
T
A
W
A
A
GKFT
P
E
K
I
A
Q
F
L
K
E
SG
I
A
E
K
V
NHR
K
A
I
L
PGGVAVL
S
G
K
L
Q
E
L
SG
W
E
I
L
V
G
P
RESSG
I
N
S
F
I
K
Q
RW
16
PsiBlast_PDB
59.36
30%
24
- C4 -
-
2LKM
-
MO4L1_HUMAN
B:
[177-231]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Q
K
Q
L
F
Y
L
P
A
K
K
N
--
V
D
S
I
L
E
D
Y
A
-
N
Y
R
K
S
R
G
N
T
D
N
K
E
----
Y
A
--
V
N
E
V
V
A
G
I
K
E
Y
F
N
V
M
L
G
-
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
59.09
11%
-23
- C3 -
-
3K9I
-
?
A:
[54-163]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
A
V
P
Y
Y
E
K
A
I
A
S
G
LQ
G
K
D
L
A
E
C
Y
L
G
L
G
S
T
F
R
T
L
G
E
Y
R
K
A
E
A
V
L
A
--
N
G
V
K
Q
F
P
N
H
Q
A
L
R
V
F
Y
--
A
M
V
L
Y
N
L
G
R
Y
E
Q
G
V
E
L
L
L
K
I
I
A
E
T
SDD
E
T
I
Q
S
Y
K
Q
A
I
L
F
Y
A
DKLDETWK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------