@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_07_1050: (2018-03-08 )
MDSASGISGSACGSRHNRPRVFCVVCGSCSEHLILRKSGLKCASCVGKSSNKHYAKLQKRQAKKLFSNAFPAQSPTAGLDTASSVQPGDCSQTNRLFSSASSSLPPAVEDYSGTAGVSTERSSTLHPIEEYISGTSVYRAVMEQACYSGENDRSGGEGGSGDRQTLMSGADGVTRSTSDALSKAHQENTASGSHTNVSSSAAAGDNAGDMRRTSPPLMTQRQESGDAQCSDPGSAKSGRDGVGKTPLCRDSSLIPPTPILDKVTEKEANNQAPARCYKTAPSRLPPRHGPRVTKGTPRLPPSAVDVSRVSAAHTVSAKSNGKATGTSSLNGATASPPSSAIKAVPAAARCVEGQDLMPESGNSVLRDATLPPAEPAAGQHHSHPSTPRGDEGTTPLAASLSQNPTHPPQVLRASRQSPTTFPDASLGLPAPRAGSCNTSITSSTMERGPASRLPLLHSHADSNAGTQVQRDSQGGTRRLSAAPSTVSTLPNTSVRPVDAPGAAGAGAPSLSRMPNSSGATAAALDNCHSVGSSSRCRHNKRGSRGGSSGDSESSSSSLSDDASAIDSSLPSVVSSATPEAVIGEDGAATSGTGTKKALHGGTNALDVGTKKRTRQVPKSVDSTMEKKGAGGSAGHGLATTPLSGYIDALHITVESVQPPLLNGPETTTFAPCGGDELPQAATSYNDESSTTTGDTHSRCDSIRSGSFRTNDGYQRQVYVVGQSGNFKVTRHIRQCSGSSDVLAGRSSAAVASSASGTLTATRLRGRQQHGSSGDTMGTGAVEVKRISYRIIVKNRCSGEVLLTQERRLYTQIIPALERVKAIAGGELPAVPVKRLPSLRFATEVFTEERRAEVEAFLQAVALSPFYVRHPEVVKLLGLELYVTDAGAAAATGAAAAKGSRGNGADAHRPSKSPRAMHTKSSPSMGVGADIEVTPLARRGAACDSKYLSRHSRDGEAGVRAAAATGRGEAGTGCLTVDALNAYCSLTMGGGGGDTADSRNFCRSQSCSSVQTSCSSVVRRRKLDEVTMEDLEHIQLGNLIGRGTFGSVYLGLVQTQRGSLMVAVKVMKVGEAVAPSEMESLQRELDVLCAARHKNIIRFLGSSLNTTTRDLRVFTEYVECGTIRSLVDRFGALTMLAIQQYMQQILSGLQYLHSLSIAHRDIKGENILVTKNGRIKLSDFGSSTGAPCKVVAAAESPSKGGSGGSADSAANGGLPVGSPQYMAPEVIHGTVKSFAAVDIWSLGCVGIEMMDRPIWRESPSTNPFVFLYRISRCGTPPHGLPTDDELAALKAEGKKTECEGFSVYLEFLRSCLRVDPEQRPSAAELLKHPFMTYPYSKHLRWMPPMPATAKPSALKSS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]



3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]



ANP_D_4(1J1B)
GSK3B_HUMAN
[Raw transfer]



YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]



GOL_B_3(4FZA)
STK26_HUMAN
[Raw transfer]



GOL_B_4(4FZA)
STK26_HUMAN
[Raw transfer]



J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]



J60_A_3(2XIK)
STK25_HUMAN
[Raw transfer]
1 PsiBlast_PDB 63.3033% -50 - C1 -2XIK 5.0 STK25_HUMAN
50 Fugue 63.2120% 17 - C1 -3C4Z - RK_BOVIN -
49 Fugue 61.8222% -2 - C1 -4AW2 - MRCKA_RAT -
3 PsiBlast_PDB 61.3332% -64 - C1 -3GGF - STK26_HUMAN -
5 PsiBlast_PDB 60.6931% -56 - C1 -3ZHP - STK24_HUMAN -
7 PsiBlast_PDB 60.5531% -56 - C1 -4U8Z 6.5 STK24_HUMAN
39 HHSearch 60.1926%-113 * C1 *5K00 - MELK_HUMAN -
16 PsiBlast_PDB 60.1831% -57 - C1 -4O27 - STK24_HUMAN -
8 PsiBlast_PDB 60.1631% -56 - C1 -4W8D 6.1 STK24_HUMAN
20 PsiBlast_PDB 58.7731% -47 - C1 -4FZA 2.4 STK26_HUMAN
9 PsiBlast_PDB 58.3431% -54 - C1 -4W8E - STK24_HUMAN -
6 PsiBlast_PDB 58.2331% -55 - C1 -3CKX - STK24_HUMAN -
52 Fugue 57.6027% 3 - C1 -5KCV - AKT1_HUMAN -
27 HHSearch 57.1332% -89 - C1 -5J5T - M4K3_HUMAN -
12 PsiBlast_PDB 55.9931% -29 - C1 -4DAW - PAK1_HUMAN -
17 PsiBlast_PDB 55.9131% -29 - C1 -4EQC - PAK1_HUMAN -
13 PsiBlast_PDB 55.9131% -29 - C1 -5DFP - PAK1_HUMAN -
14 PsiBlast_PDB 55.7332% -36 - C1 -4ZJI - PAK1_HUMAN -
19 PsiBlast_PDB 55.4731% -25 - C1 -3Q53 - PAK1_HUMAN -
10 PsiBlast_PDB 55.2631% -32 - C1 -3FXZ - ? -