@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_13_0670: (2018-03-08 )
MRIRLLACSRVEYGRVGPLKQCFPLISPGLLAHTSSRDSVCASAEAHPVLSTTVVLLPSSLFSLCRCSVKASGEATVLNGEGGARVVSAVHQAHPHEPLVGLMTQPLPLSTILRHPLASKRCMMIFHQNGEETMELFELLSRYEAVGPIGQGSYGYVCSARDNDLVERFQAKPPEEYEDASLTLEEREEVYDTNTLVAIKKLRQLFENNQPRMWLCATREIQLMMAFQHDNVMSATDFFIPLGGVEMMTYDSILQLQHTFDGVYVVMKKMDYTLREVLDSTIVTAAELAPGYETWLRRLRLLMANCGEVNADVSSTPTPVRASRLNVKAEAQGEDQAAAAPHSSTEQSRSGGREDVEDEAGATVPSSLDYPVAAAAAAAAPTNDHDAPVAKTSTDGGFEGKGGGDDEGAPVCCPLTTVALHSLTRDYRKFILYQIFRGVGYLHLCPVIHRDLKPENIMLDRSYGTRITDFGQGRDVGLNATTDYVQTVLDNCTQWYAAPETLTVAINSPMGFIDHDSFHGVDVWSIGCIAAEMLIGRPLFYTTSMGGKSQLLSIFRVLGEPSASAIESIAEYRDKETRELFMNSVKKLVKTAPPSNTITPTLAELLRSPYGDEDEDEVGLIIDCLRWDPRERITIQAALQNPFFTKDGYDPVIDPEDTAKRVPSVRPEDISEPVSGRAFLWNLFLERHPEVKELWNSLVAKHEEELKVKKAAADT

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]



E94_A_2(4FV7)
MK01_HUMAN
[Raw transfer]



6TT_A_6(5LCK)
MK01_HUMAN
[Raw transfer]



CQ6_A_3(4ZZM)
MK01_HUMAN
[Raw transfer]



3RA_A_2(4AZF)
DYRK2_HUMAN
[Raw transfer]



E28_A_2(4G6O)
MK01_HUMAN
[Raw transfer]



1N1_A_3(3OHT)
?
[Raw transfer]



EK2_A_2(4FUY)
MK01_HUMAN
[Raw transfer]
22 HHSearch 94.3234%-121 - C1 -5BYZ - MK07_HUMAN -
40 HHSearch 88.6032%-121 - C1 -3COI - MK13_HUMAN -
35 HHSearch 88.2434%-129 - C1 -2YIX - MK14_HUMAN -
25 HHSearch 85.2031%-120 - C1 -4ZZN - MK01_HUMAN -
43 HHSearch 84.3731%-116 - C1 -4XNE - MK01_RAT -
27 HHSearch 82.5433% -57 - C1 -5CI6 - MPK6_ARATH -
32 HHSearch 81.0131% -96 - C1 -3N9X - ? -
26 HHSearch 80.8434%-145 - C1 -2FST - MK14_HUMAN -
41 HHSearch 77.6229%-106 - C1 -1UNL - CDK5_HUMAN -
30 HHSearch 73.0431% -7 - C1 -3OZ6 - ? -
24 HHSearch 71.5831% -96 * C1 *1J1B - GSK3B_HUMAN -
31 HHSearch 71.4031%-107 - C1 -1UA2 - CDK7_HUMAN -
6 PsiBlast_PDB 56.4031%-134 - C1 -5BYY - MK07_HUMAN -
2 PsiBlast_PDB 55.1931%-145 - C1 -4B99 - MK07_HUMAN -
7 PsiBlast_PDB 52.8331% -88 - C1 -5BYZ - MK07_HUMAN -
53 Fugue 52.3620% 12 - C1 -4AW2 - MRCKA_RAT -
13 PsiBlast_PDB 52.3632% -48 - C1 -3SA0 - MK01_HUMAN -
46 Fugue 52.3219% 29 - C1 -1KOB - ? -
3 PsiBlast_PDB 51.7131% -89 - C1 -4ZSL - MK07_HUMAN -
44 HHSearch 51.6323% -37 - C1 -3C0G - CSKP_HUMAN -
17 PsiBlast_PDB 51.5332% -50 - C1 -4FV7 4.7 MK01_HUMAN
18 PsiBlast_PDB 51.3332% -47 - C1 -4G6O 4.4 MK01_HUMAN