@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPV1: (2017-11-23 )
MELLIQPGKLTLADLRQAYLNPIKVKLDESASSAINTSVACVEQIVNEGRTAYGINTGFGLLASTKIAPEDLEKLQRSLVLSHAAGVGEALDDAMVRLIILLKANSLARGFSGIRRKVIDALLALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGESKARYKGEWLPAVEALKIAGLEPISLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHEVRGQRGQIDVAAAYRDLLTDSSEISRSHEECGKVQDPYSLRCQPQVMGACLTQIRQAAEVLEIEANAVSDNPLVFAEQGDVISGGNFHAEPVAMAADNLALAIAEIGSLSERRISMMMDRHMSQLPPFLVANGGVNSGFMIAQVTAAALASDNKALAHPASVDSLPTSANQEDHVSMAPNAGKRLWYMADNVCGILAVEWLGACQGLDFREGLKSSPKLEQARKILRDQVPYYSEDRFFAPDIEQASELLASGCLNELLIPKLLPSLSEV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

296_A_4(2RJS)
TAM_STRGL
[Raw transfer]



247_A_3(2QVE)
TAM_STRGL
[Raw transfer]



295_A_3(2RJR)
TAM_STRGL
[Raw transfer]



CYS_A_2(1GKM)
HUTH_PSEPU
[Raw transfer]
4 PsiBlast_PDB 99.3279% -96 - C5 -1B8F - HUTH_PSEPU -
2 PsiBlast_PDB 99.1479% -95 - C5 -1GK3 - HUTH_PSEPU -
6 PsiBlast_PDB 99.0778% -96 - C5 -1EB4 - HUTH_PSEPU -
1 PsiBlast_PDB 98.9379% -94 - C5 -1GK2 - HUTH_PSEPU -
22 PsiBlast_CBE 98.6879% -93 - C5 -1GK2 - HUTH_PSEPU -
5 PsiBlast_PDB 98.6278% -97 - C5 -1GKJ - HUTH_PSEPU -
23 PsiBlast_CBE 98.5779% -93 - C5 -1GK2 - HUTH_PSEPU -
21 PsiBlast_CBE 98.0879% -92 - C5 -1GK2 - HUTH_PSEPU -
3 PsiBlast_PDB 75.4479% -41 - C5 -1GKM 2.8 HUTH_PSEPU
34 HHSearch 64.4535% -46 * C5 *2O6Y - TALY_RHOS4 -
8 PsiBlast_PDB 61.4035% -42 - C5 -3KDY - TAM_STRGL -
12 PsiBlast_PDB 61.0235% -44 - C5 -2OHY - TAM_STRGL -
36 HHSearch 58.5430% -17 - C5 -2NYN - PAL_ANAVT -
14 PsiBlast_PDB 57.3235% 1 - C5 -2O6Y - TALY_RHOS4 -
18 PsiBlast_PDB 55.3835% -22 - C5 -2O7E - TALY_RHOS4 -
16 PsiBlast_PDB 55.0835% -23 - C5 -2O7D - TALY_RHOS4 -
19 PsiBlast_PDB 54.9635% -24 - C5 -2O7F - TALY_RHOS4 -
17 PsiBlast_PDB 54.8835% -23 - C5 -2O78 - TALY_RHOS4 -
15 PsiBlast_PDB 54.6635% -23 - C5 -2O7B - TALY_RHOS4 -
20 PsiBlast_PDB 54.1431% -25 - C5 -4C5U - ? -