@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPZ8: (2017-11-24 )
MSAAPRIGILGAGGRMGRTLIQAVQQAGYQLAAAVERPESSLVGTDAGELAGIGSVGVKVSGSLADVLKDCDVIIDFTAPAATAQHLKLCREAGVAMVIGTTGMSDEQKAELDEAATHIPVVYAANYSVGVNVSIKLLELAAKVFGDTVDIEVIEAHHRHKVDAPSGTALMMGEAIADTLGRNLKEVAVYGREGHTGPRDRQTIGFETIRGGDIVGEHTVMFIGEGERVEVTHKATNRMNFAAGAVRAAAWVVGREARKYDMKDVLGLNDVQV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_E_5(1DIH)
?
[Raw transfer]



NAD_D_12(1ARZ)
DAPB_ECOLI
[Raw transfer]



NAD_C_10(1ARZ)
DAPB_ECOLI
[Raw transfer]



NAP_A_5(3IJP)
DAPB_BARHE
[Raw transfer]



NDP_E_5(1DIH)
DAPB_ECOLI
[Raw transfer]



NAD_B_8(1ARZ)
DAPB_ECOLI
[Raw transfer]



NHD_E_5(1DRW)
DAPB_ECOLI
[Raw transfer]



NHD_E_5(1DRW)
DAPB_ECOLI
[Raw transfer]



NAD_E_5(1DRU)
DAPB_ECOLI
[Raw transfer]



NAD_E_5(1DRU)
DAPB_ECOLI
[Raw transfer]



NAD_A_3(4YWJ)
DAPB_PSEAE
[Raw transfer]



A3D_E_5(1DRV)
DAPB_ECOLI
[Raw transfer]



NAD_A_3(4YWJ)
DAPB_PSEAE
[Raw transfer]



NAD_B_7(4YWJ)
DAPB_PSEAE
[Raw transfer]



GOL_B_18(3QY9)
DAPB_STAAC
[Raw transfer]



PDC_K_11(1P9L)
DAPB_MYCTU
[Raw transfer]



PDC_K_11(1C3V)
DAPB_MYCTU
[Raw transfer]
21 PsiBlast_CBE 78.7063% -29 - C1 -4YWJ 10.0 DAPB_PSEAE
36 HHSearch 78.5364% -34 - C1 -4YWJ 10.1 DAPB_PSEAE
1 PsiBlast_PDB 77.4663% -27 - C1 -4YWJ 10.1 DAPB_PSEAE
45 HHSearch 76.5861% -42 * C1 *1DRU 7.3 DAPB_ECOLI
46 HHSearch 76.2461% -43 - C1 -1DRW 8.7 DAPB_ECOLI
6 PsiBlast_PDB 75.9162% -28 - C1 -1DRW 8.7 DAPB_ECOLI
4 PsiBlast_PDB 75.2662% -26 - C1 -1DRU 7.3 DAPB_ECOLI
3 PsiBlast_PDB 74.9862% -26 - C1 -1DIH 8.5 DAPB_ECOLI
2 PsiBlast_PDB 74.5262% -26 - C1 -1ARZ - DAPB_ECOLI -
24 PsiBlast_CBE 74.2762% -25 - C1 -1ARZ 6.8 DAPB_ECOLI
22 PsiBlast_CBE 73.9462% -27 - C1 -1ARZ 7.4 DAPB_ECOLI
43 HHSearch 73.7154% -58 - C1 -4F3Y - DAPB_BURTA -
23 PsiBlast_CBE 73.5862% -25 - C1 -1ARZ 7.2 DAPB_ECOLI
44 HHSearch 73.5554% -59 - C1 -4F3Y - DAPB_BURTA -
5 PsiBlast_PDB 73.5562% -20 - C1 -1DRV 6.8 DAPB_ECOLI
7 PsiBlast_PDB 73.0455% -44 - C1 -4F3Y - DAPB_BURTA -
10 PsiBlast_PDB 70.0532%-138 - C1 -3QY9 - DAPB_STAAC -
59 Fugue 69.6934%-135 - C1 -3QY9 - DAPB_STAAC -
39 HHSearch 69.4141% -26 - C1 -3IJP - DAPB_BARHE -
40 HHSearch 69.0834%-136 - C1 -3QY9 - DAPB_STAAC -
29 PsiBlast_CBE 66.1432%-129 - C1 -3QY9 2.9 DAPB_STAAC
60 Fugue 44.6871% -94 - C1 -1DIH Error ?