@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VT52: (2017-12-11 )
MPFFIVFHFYKGKIMRAYNFCAGPAALPTAVLEKAQQELLDWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLMNIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEAGIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVKAPLVCDFSSSILSAPLDVSKFGLIYAGAQKNIGPAGLTIVIIRDDLLDQAKAEIPSILKYADQAKNGSMVNTPSTYAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSDFYNNPIAIPNRSIMNVPFTLADKALEKQFLKEAEANHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRNG

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_B_4(3QBO)
?
[Raw transfer]



PLP_B_11(2BIA)
SERC_BACAO
[Raw transfer]



PLP_B_18(1W23)
SERC_BACAO
[Raw transfer]



PLP_B_11(2BI3)
SERC_BACAO
[Raw transfer]



PLP_B_11(2BI2)
SERC_BACAO
[Raw transfer]



PLP_A_10(1W23)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BI5)
SERC_BACAO
[Raw transfer]



PLP_A_3(1BT4)
SERC_BACCI
[Raw transfer]



PLP_A_3(1BT4)
SERC_BACCI
[Raw transfer]



PLP_A_10(1W23)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BIG)
SERC_BACAO
[Raw transfer]



PLP_A_2(1W3U)
SERC_BACCI
[Raw transfer]



PLP_B_5(4AZK)
SERC_BACAO
[Raw transfer]



PLP_B_11(2BI9)
SERC_BACAO
[Raw transfer]



PLP_A_3(2C0R)
SERC_BACCI
[Raw transfer]



PLP_A_3(2C0R)
SERC_BACCI
[Raw transfer]



PLP_A_3(3QBO)
?
[Raw transfer]



PLP_A_3(2BI2)
SERC_BACAO
[Raw transfer]



PLP_B_11(2BI5)
SERC_BACAO
[Raw transfer]



PLP_B_6(3E77)
SERC_HUMAN
[Raw transfer]



PLP_B_4(2C0R)
SERC_BACCI
[Raw transfer]



PLP_B_11(2BHX)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BHX)
SERC_BACAO
[Raw transfer]



PLP_B_10(2BIE)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BI9)
SERC_BACAO
[Raw transfer]



PLP_A_4(3E77)
SERC_HUMAN
[Raw transfer]



PLP_B_10(2BIG)
SERC_BACAO
[Raw transfer]



PLP_A_4(3E77)
SERC_HUMAN
[Raw transfer]



PLP_A_3(2BI1)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BIA)
SERC_BACAO
[Raw transfer]



PLP_B_11(2BI1)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BIE)
SERC_BACAO
[Raw transfer]



PLP_A_3(4AZK)
SERC_BACAO
[Raw transfer]



PLP_A_3(2BI3)
SERC_BACAO
[Raw transfer]



MES_B_5(3M5U)
SERC_CAMJE
[Raw transfer]



PLP_A_3(1BJO)
SERC_ECOLI
[Raw transfer]



PLP_A_3(1BJO)
SERC_ECOLI
[Raw transfer]
22 PsiBlast_CBE 94.3458% -58 - C1 -3QBO 4.5 ?
3 PsiBlast_PDB 93.8758% -58 - C1 -3QBO 3.9 ?
1 PsiBlast_PDB 93.5165% -47 - C1 -4XK1 - SERC_PSEAE -
59 Fugue 90.1458% -38 * C1 *1BJO 4.7 SERC_ECOLI
5 PsiBlast_PDB 89.8758% -37 - C- -1BJN - SERC_ECOLI -
4 PsiBlast_PDB 88.3458% -37 - C1 -1BJO 4.7 SERC_ECOLI
42 HHSearch 84.1364% -24 - C1 -4XK1 - SERC_PSEAE -
27 PsiBlast_CBE 83.9947% -49 - C1 -2BIA 3.9 SERC_BACAO
29 PsiBlast_CBE 83.2247% -47 - C1 -2BI5 4.8 SERC_BACAO
23 PsiBlast_CBE 83.1649% -40 - C1 -2C0R 4.7 SERC_BACCI
30 PsiBlast_CBE 82.9247% -47 - C1 -2BI3 4.6 SERC_BACAO
32 PsiBlast_CBE 82.8347% -46 - C1 -2BI1 4.5 SERC_BACAO
37 PsiBlast_CBE 82.7347% -47 - C1 -2BIE 4.3 SERC_BACAO
28 PsiBlast_CBE 82.6847% -47 - C1 -2BI9 4.8 SERC_BACAO
35 PsiBlast_CBE 82.4847% -46 - C1 -2BIG 3.7 SERC_BACAO
7 PsiBlast_PDB 82.2549% -40 - C1 -2C0R 4.5 SERC_BACCI
31 PsiBlast_CBE 82.0747% -46 - C1 -2BI2 4.7 SERC_BACAO
34 PsiBlast_CBE 82.0647% -47 - C1 -1W23 3.8 SERC_BACAO
33 PsiBlast_CBE 81.9347% -45 - C1 -2BHX 4.5 SERC_BACAO
41 HHSearch 81.5057% -18 - C- -1BJN - SERC_ECOLI -
25 PsiBlast_CBE 81.0647% -41 - C1 -4AZK 4.1 SERC_BACAO
6 PsiBlast_PDB 81.0349% -36 - C1 -1W3U 4.4 SERC_BACCI
19 PsiBlast_PDB 81.0047% -41 - C1 -4AZK 3.9 SERC_BACAO
10 PsiBlast_PDB 80.8947% -42 - C1 -1W23 3.8 SERC_BACAO
16 PsiBlast_PDB 80.6747% -40 - C1 -2BI9 4.7 SERC_BACAO
14 PsiBlast_PDB 80.6247% -40 - C1 -2BI3 4.7 SERC_BACAO
8 PsiBlast_PDB 80.5749% -39 - C1 -1BT4 3.2 SERC_BACCI
13 PsiBlast_PDB 80.5247% -40 - C1 -2BI2 4.6 SERC_BACAO
36 PsiBlast_CBE 80.2747% -41 - C1 -2BIG 4.5 SERC_BACAO
15 PsiBlast_PDB 80.2547% -39 - C1 -2BI5 4.8 SERC_BACAO
12 PsiBlast_PDB 80.2547% -39 - C1 -2BI1 4.6 SERC_BACAO
17 PsiBlast_PDB 80.0947% -41 - C1 -2BIA 4.7 SERC_BACAO
20 PsiBlast_PDB 79.8147% -41 - C1 -2BIE 4.2 SERC_BACAO
11 PsiBlast_PDB 79.8147% -39 - C1 -2BHX 4.3 SERC_BACAO
38 HHSearch 78.6447% -33 - C1 -1W23 3.8 SERC_BACAO
9 PsiBlast_PDB 77.5951% -28 - C1 -3E77 3.5 SERC_HUMAN
24 PsiBlast_CBE 77.2451% -27 - C1 -3E77 3.8 SERC_HUMAN
48 HHSearch 75.9348% -15 - C1 -3E77 3.5 SERC_HUMAN
44 HHSearch 68.4044% -11 - C1 -3M5U 2.3 SERC_CAMJE
43 HHSearch 67.0348% 1 - C1 -1BT4 3.2 SERC_BACCI
47 HHSearch 66.3748% 0 - C1 -2C0R 4.5 SERC_BACCI