@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUU2: (2017-12-20 )
MSGLQEEYLQHQTKIEQLRLSIQYIRWYLVSLILLCLISAIIFFCYFTSYITNFIWSIGFTILTLTCLLFVPKLLTHYRDIHFIKKTDLVLQGICLASGILMGINIIVLHFSLPDTLISVSDVHILIALFITSAHIIGLTFLTQQPRYFYLLFIPSTVPLIIGQFTHSQITQLPFYFAYNLAFVATLLCAYATQRNYQKISQLLFKNKQLVQVAEQHTQWAEELCVQLQQEVNKSKDIEAQLQFNNHLLEQKVRERTYDLTKMNERLESHHHNLAFAHETAGIRPWDWDIEKQKLEITFFDQQKQTQNTPLHLKSILERIHPNDRKLFDERLKEHLEGKSDHFNITFRILRRNGSWRWIHDVGRVISRDPKTNKALRMVGMTRDIHQEKKDQEHLRLSAIVLEQAAEGIFILDEKLNYIEVNPYYEKLTGFSKSELLSQQLFNITINQKLQQQQFHDSITQQLLKTGEYMGQFDEKFTSGKSVYLWLHINAVKDEYNQIINYIGFARDLTEQKRQEQHLSYLKNYDSLTHLPNRFYYYNQLHQYLVNPSYSFKNLALIRINIDRFRAFNEFLNNDSGDELLKQFAQRLRLTNINAILVAYLNGDDFAIIYEISPIHPNIEQYCQNILQALNAPFYIDEQEYFITASIGVACFPEHGRQIDHLNNHAEQALSEAKRLGGNTISYYCNKTTNPYKTADLEQELRKAIQNDEFVVYYQPKINLNDKSIKGFEALIRWQHPEKGLVMPNMFIPFAERSSLISDIGKVVLDKVGKQLQEWKKAGYADVRVSVNIVAQQIHRGLLLSDLDEVLDTYHLDGSNLELEITESALLDNTDNVKKLLHSIKERNISIALDDFGTGYSSLAYLTEYPIDVLKIDQAFVSKIGDQKQEAIVNAMIAMGKSMGLKLVAEGVETEEQVIYLQKQQCDFLQGFFFSRPLHPNQILQYLQTNTHI

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C2E_A_4(4RNH)
?
[Raw transfer]



C2E_A_4(4RNH)
?
[Raw transfer]



C2E_A_3(5M1T)
Y1727_PSEAE
[Raw transfer]



C2E_A_3(5M1T)
Y1727_PSEAE
[Raw transfer]



C2E_B_6(5M1T)

[Raw transfer]



C2E_A_3(3N3T)
?
[Raw transfer]



C2E_A_6(4Y9P)
?
[Raw transfer]



C2E_A_2(5MF5)
?
[Raw transfer]



C2E_A_2(5MF5)
?
[Raw transfer]



C2E_A_6(5MKG)
?
[Raw transfer]



NACID_C_3(3U2E)
?
[Raw transfer]
-
G_A_4(5MFU)
?
[Raw transfer]



G_A_5(5MFU)
?
[Raw transfer]



C2E_A_3(3GFZ)
?
[Raw transfer]



C2E_A_4(3GFX)
?
[Raw transfer]



C2E_B_7(3GFZ)
?
[Raw transfer]



C2E_A_3(3GG1)
?
[Raw transfer]



C2E_A_3(3GG0)
?
[Raw transfer]



C2E_B_7(3GG1)
?
[Raw transfer]



C2E_B_7(3GG0)
?
[Raw transfer]



C2E_B_7(3GFX)
?
[Raw transfer]



IMD_A_6(4LJ3)
YAHA_ECOLI
[Raw transfer]



IMD_A_6(4LJ3)
YAHA_ECOLI
[Raw transfer]



IMD_B_11(4LJ3)
YAHA_ECOLI
[Raw transfer]
45 HHSearch 82.2137% -16 - C2 -4RNH 8.3 ?
44 HHSearch 80.0636% -16 - C2 -4RNF - ? -
1 PsiBlast_PDB 78.7137% -16 - C2 -4RNH 8.3 ?
2 PsiBlast_PDB 78.1437% -15 - C2 -4RNF - ? -
13 PsiBlast_PDB 68.7237%-104 - C2 -4Y9N - ? -
49 HHSearch 68.5337% -92 - C2 -4RNI - ? -
4 PsiBlast_PDB 68.3542% -87 - C2 -4RNJ - ? -
12 PsiBlast_PDB 68.3437%-104 - C2 -4Y9M - ? -
53 HHSearch 67.5537%-101 - C2 -4Y9M - ? -
15 PsiBlast_PDB 67.5237%-104 - C2 -4Y9O - ? -
22 PsiBlast_CBE 66.4937% -94 - C2 -4Y9P - ? -
3 PsiBlast_PDB 66.2942% -91 - C2 -4RNI - ? -
18 PsiBlast_PDB 66.1737% -96 - C2 -5MF5 9.0 ?
24 PsiBlast_CBE 65.9937% -91 - C2 -5MKG 9.9 ?
5 PsiBlast_PDB 65.8639% -86 - C2 -5M1T 7.5 Y1727_PSEAE
16 PsiBlast_PDB 65.6937%-100 - C2 -5MKG - ? -
54 HHSearch 65.5037% -94 - C2 -5MF5 9.0 ?
52 HHSearch 64.6036% -86 - C2 -5M1T 7.5 Y1727_PSEAE
14 PsiBlast_PDB 63.7037% -85 - C2 -4Y9P 8.8 ?
17 PsiBlast_PDB 63.4037% -96 - C2 -5MFU 5.6 ?
21 PsiBlast_CBE 61.4539% -83 - C2 -5M1T 8.8
30 PsiBlast_CBE 60.0031%-100 - C2 -4LJ3 2.6 YAHA_ECOLI
31 PsiBlast_CBE 59.5631%-104 - C2 -4LJ3 4.0 YAHA_ECOLI
58 HHSearch 59.5530%-101 - C2 -4LJ3 4.0 YAHA_ECOLI
7 PsiBlast_PDB 58.0342% -17 - C2 -3N3T 8.5 ?
32 PsiBlast_CBE 42.9437% -66 - C2 -3GG1 3.6 ?
33 PsiBlast_CBE 42.5937% -68 - C2 -3GG1 3.7 ?
35 PsiBlast_CBE 42.0537% -57 - C2 -3GG0 3.5 ?
38 PsiBlast_CBE 41.4337% -69 - C2 -3GFX 3.7 ?
34 PsiBlast_CBE 40.5637% -68 - C2 -3GG0 3.5 ?
36 PsiBlast_CBE 40.2037% -63 - C2 -3GFZ 3.8 ?
39 PsiBlast_CBE 39.6337% -57 - C2 -3GFX 3.8 ?
37 PsiBlast_CBE 38.9237% -59 - C2 -3GFZ 3.6 ?