@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ69: (2018-01-12 )
MRQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVSAGIYSYLPLANRVLEKLKRIMREEFEKIGAVEMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKKLPLNLYQIQPKYRDEKRPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTEVFKRCGLEFRSIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSYYVSKKSHETQLELEKVATPNVKSIDEVADFFSVEPQKIIKSVLFIADEQPVLVLVRGDHEVNDVKLKNFLSADFLEEATEEEAQKYLGAEFGSVGPVGVSDDVKVYADRYVQDLANAITGANETGFHYKNVNPERDFTVLSYEDLRFVQEGDPSPDNNGVLAFTRGIEIGHIFKIGTRYSESMGATVLDENGREKFVIMGCYGIGVSRLLSAIVEQHSDEQGINWPKGIAPFDLHIVQMNLKDEYQTNLTNELEEAMTKAGYEVLVDDRNERAGVKFADSDLIGCPIRITVGKKAVDGIVEVKIKKTGEMVEVRKEELVNTLPILLNQGE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P5A_B_25(2J3L)
SYP_ENTFA
[Raw transfer]



P5A_B_25(2J3L)
SYP_ENTFA
[Raw transfer]



P5A_A_24(2J3L)
SYP_ENTFA
[Raw transfer]



ATP_A_3(2J3M)
SYP_ENTFA
[Raw transfer]



ATP_A_3(2J3M)
SYP_ENTFA
[Raw transfer]



P5A_A_24(2J3L)
SYP_ENTFA
[Raw transfer]



ATP_B_7(2J3M)
SYP_ENTFA
[Raw transfer]
30 Fugue 97.8783% -84 - C1 -2J3L 9.3 SYP_ENTFA
1 PsiBlast_PDB 97.8783% -84 - C1 -2J3L 9.3 SYP_ENTFA
41 HHSearch 96.0784% -80 * C1 *2J3L 9.3 SYP_ENTFA
22 PsiBlast_CBE 95.8283% -80 - C1 -2J3L 9.3 SYP_ENTFA
21 PsiBlast_CBE 95.2083% -75 - C1 -2J3M 8.8 SYP_ENTFA
40 HHSearch 93.1884% -79 - C1 -2J3M 8.0 SYP_ENTFA
2 PsiBlast_PDB 92.9383% -79 - C1 -2J3M 8.0 SYP_ENTFA
42 HHSearch 72.3748% -20 - C1 -5UCM - SYP_PSEAE -
3 PsiBlast_PDB 69.4748% -25 - C1 -5UCM - SYP_PSEAE -
44 HHSearch 62.2742% -22 - C1 -2I4L - SYP_RHOPA -
43 HHSearch 58.4042% -25 - C1 -2I4N - SYP_RHOPA -
7 PsiBlast_PDB 48.5549% -85 - C1 -2I4O - SYP_RHOPA -
28 PsiBlast_CBE 48.5449% -80 - C1 -2I4M - SYP_RHOPA -
50 HHSearch 48.2021% 1 - C1 -4WI1 - SYP_PLAF7 -
25 PsiBlast_CBE 47.9749% -79 - C1 -2I4O - SYP_RHOPA -
24 PsiBlast_CBE 47.9549% -82 - C1 -2I4O - SYP_RHOPA -
29 PsiBlast_CBE 47.7149% -79 - C1 -2I4M - SYP_RHOPA -
5 PsiBlast_PDB 47.5349% -88 - C1 -2I4M - SYP_RHOPA -
6 PsiBlast_PDB 47.4849% -82 - C1 -2I4N - SYP_RHOPA -
4 PsiBlast_PDB 46.1949% -86 - C1 -2I4L - SYP_RHOPA -