@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_11_0110: (2018-03-08 )
MGGELDDQNKDAPDDGNAARKRACLEHVLPSMQQRFAELAHASVGESSLTVEALFQRYQRVLKVGEGTFGEVFVLYDTVAHTYITMKRMHTLLSLRRRSLGIHRCTFREVELLAALQHPNIVQVLDYHILSDGSLVMLMPVIAHDLTSLLRRWPATPQSSGHGTASTAASMRPRMPLHVVKCIFRQIIAGIAYLHKHKVVHRDLKPSNVMVDHTGVVKLIDFGWSRFCAAAGAMTGPPCVTAFRPPEVLVGAHNHYTFSLDIWCCGCILFEMLTGGTPFAKSRNEAECLANIVDWLGSPPSSSEVYYRCAARCTFPLAPGRPDTFAQRCNNYGIKSAEAMFLRRMLCLEPGERATAEALLRDPWFTTAPTMCVPRAIPLPAHNMFRLVEVKRKELEH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_12(4ERW)
CDK2_HUMAN
[Raw transfer]



EDO_A_5(4ERW)
CDK2_HUMAN
[Raw transfer]
5 PsiBlast_PDB 86.6130%-115 - C1 -1V0P - CDC2H_PLAFK -
8 PsiBlast_PDB 85.2729% -97 - C1 -5HQ0 - CDK1_HUMAN -
7 PsiBlast_PDB 85.2729% -97 - C1 -4Y72 - CDK1_HUMAN -
9 PsiBlast_PDB 84.2129%-102 - C1 -5LQF - CDK1_HUMAN -
10 PsiBlast_PDB 81.6829% -92 - C1 -4YC3 - CDK1_HUMAN -
15 PsiBlast_PDB 81.1029%-108 - C1 -2WIH - CDK2_HUMAN -
2 PsiBlast_PDB 81.0230%-107 - C1 -3NIZ - ? -
18 PsiBlast_PDB 80.4929%-109 - C1 -2WXV - CDK2_HUMAN -
14 PsiBlast_PDB 80.3029%-113 - C1 -2BKZ - CDK2_HUMAN -
3 PsiBlast_PDB 79.9630% -95 - C1 -1V0O - CDC2H_PLAFK -
12 PsiBlast_PDB 78.9429%-109 - C1 -2C4G - CDK2_HUMAN -
13 PsiBlast_PDB 78.2129%-108 - C1 -2BPM - CDK2_HUMAN -
17 PsiBlast_PDB 77.0429%-105 - C1 -2WPA - CDK2_HUMAN -
11 PsiBlast_PDB 76.8329%-107 - C1 -1VYW - CDK2_HUMAN -
16 PsiBlast_PDB 75.1429%-108 - C1 -2WIP - CDK2_HUMAN -
6 PsiBlast_PDB 74.8429%-126 - C1 -4ERW 3.3 CDK2_HUMAN
1 PsiBlast_PDB 74.6430%-114 - C1 -2QKR - ? -
20 PsiBlast_PDB 73.6429%-108 - C1 -3PXF - CDK2_HUMAN -
40 HHSearch 68.1327% -95 - C1 -1UA2 - CDK7_HUMAN -
19 PsiBlast_PDB 66.5029% - - C- -4YC6 - CDK1_HUMAN -