@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_13_0280: (2018-03-08 )
MLVTMENYQIIESIGEGSFGKVYKARIKGTGQIVAMKFIVKKGKNEKELKNLRSEIEILTKLNHPHIIMLFDSFETDSDFVVVMEYAQGELYDILEDEKQLPAKEVQKIAKQLIQALNYLHSNRIIHRDMKPQNILIGQNGAVKLADFGFARSMSYNTIVLTSIKGTPLYMAPELVQERAYDNRVDLWSLGCILYELYYGKPPFYTNNLFALIKKIVCEPVKYDSKANDPISPEFKSFLSGLLTKSASSRLNWPELLNHPFVQLTKSDASWQDAIMQHDSRMKARMDRLGCLRLHGNAGRAAPKRKSTQSDDIFNLKTVQKLTSGCEFDVCATLTQLVRMARASNGDVTKSTALLGVFDSGVLEAALTLLNEKQSVKVVGLVLQFVQELVFPEHGDLLAFPSQRPKRDGLAVLEEKHSRQQEDLFIRQQVALKLMKKPHTALDFIISEISSGGDSLAETCVKIMFQCFRWENSFGPMVTQLRTFPEMWAAILKSVNHHSVSRGETSHEYAALVFHTVSIVIPHVKLASPQRINREEVLELVTQGLSAVCYYEAGMVDAHRNKTPPLVYAAAAALLIAFAHRELKDIVSFKVNGALLDGIYSIVDAVTDAPSRPVTPRALGSSYGYPDYGLLDGVAHMLSLVFSDSDSLVYAKLPGRSEHRFLESDTKSLALLVMTLLRDSDPRMELSPNGVQTLLRAAQQIFQQEKEQALSMSLLMEPIAPYSGESGSLCWLSVICRTMKTDYFRQLFYWPACRGGGATGVSAHVTIVSQILSDSLRPVSSSSNPTPVEDKLLGDVSRVLYKEKVIELLVHAMDYSEGVFLGSPFAIIAKLCANSADSIKAFVDCGGVDAARIRRILDPDKAGTGLMSDGLVVLSQMARMSAEFYEPIHRSNLYDCLAALLQHSEKDLRGKTCTLIGNLCKHSDFFFEPLEKNHIVERLVKCCSDSDAQTQKLAAFAIGNAAFHSGYLYNLLSPAIPSLVGLLACGDAKTRQNAAGALSNFVRNGDQLVSSLAESSVVESLLKMLRDDDTPSSKKVAVLTINSFCAYDVFRRKFIALNLREDIRKLQQDPNARADPSIQKYVGNLVDRLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(2PHK)
PHKG1_RABIT
[Raw transfer]



ANP_A_5(3IGO)
?
[Raw transfer]



GVD_A_9(2UV2)
SLK_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



DKI_A_2(2JFL)
SLK_HUMAN
[Raw transfer]



DKI_A_13(2J51)
SLK_HUMAN
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]



BK1_A_5(3NCG)
?
[Raw transfer]



AMP_A_6(4Y5Q)
?
[Raw transfer]



6UI_A_3(4USF)
SLK_HUMAN
[Raw transfer]



EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]
50 Fugue 69.3624% 44 - C1 -2ACX - GRK6_HUMAN -
26 HHSearch 63.2835% -9 - C1 -2PHK 5.0 PHKG1_RABIT
55 Fugue 62.9334% 9 - C1 -5KCV - AKT1_HUMAN -
30 HHSearch 61.9733% -53 - C1 -5IG1 - ? -
53 Fugue 61.1427% 10 - C1 -4AW2 2.2 MRCKA_RAT
25 HHSearch 60.5532% -49 - C1 -3KK8 - KCC2D_CAEEL -
13 PsiBlast_PDB 59.5735% -42 - C1 -3MWU 6.7 ?
32 HHSearch 59.1633% -48 - C1 -5IG1 - ? -
15 PsiBlast_PDB 59.0835% -37 - C1 -4Y5Q 4.6 ?
16 PsiBlast_PDB 58.9035% -44 - C1 -2WEI - ? -
23 HHSearch 58.8435% -4 - C1 -2Y7J - PHKG2_HUMAN -
36 HHSearch 58.2131% -46 * C1 *2VN9 - KCC2D_HUMAN -
11 PsiBlast_PDB 58.1434% -32 - C1 -5AJQ - STK10_HUMAN -
14 PsiBlast_PDB 58.0535% -43 - C1 -3NCG 7.7 ?
3 PsiBlast_PDB 57.4637% -30 - C1 -2JFM - SLK_HUMAN -
12 PsiBlast_PDB 57.3535% -34 - C1 -3IGO 5.5 ?
24 HHSearch 56.8235% -2 - C1 -2Y7J - PHKG2_HUMAN -
17 PsiBlast_PDB 56.8235% -51 - C1 -3DFA - ? -
1 PsiBlast_PDB 56.0937% -50 - C1 -4USF 6.4 SLK_HUMAN
2 PsiBlast_PDB 55.8237% -38 - C1 -2J51 4.9 SLK_HUMAN