@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MPK4: (2018-07-14 )
MAQLVPLVELPSGKKIYSVRGQQFEVDRQYDLVKVVGFGACGTVCSAVANGSGERVAIKRLSRVFGDLREGKRILREMEIMTSLKHNNLIRLHHFMRPQSKETFEDIYLVMDLYDTDLNRIIRSRQKLTDEHLQYFMIQAFRGLHYLHSAKVMHRDLKPSNLLVNADCALAICDFGLARDDQVMSSSDLTQYVVTRWYRPPEVLGMGSNQYTSAVDVWSLGLIFAELMLGRTLLPGTDYIGQLVMIVNLLGSPSIDDMEFLSSEAKAFILSQPRRPALSFRDLFPMATEEATDLLSKLLVFHPARRLTAKQVMEHPYFSKYRDAAEEADAPDPFVWNHSHIETKEQLREDLWRVVEAHSQSNG

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

38Z_A_12(4QTA)
MK01_HUMAN
[Raw transfer]




4V8_A_2(5BUE)
MK01_HUMAN
[Raw transfer]




4VB_A_2(5BUJ)
MK01_HUMAN
[Raw transfer]




ANP_B_7(4QNY)
?
[Raw transfer]




19A_C_3(2OJG)
MK01_HUMAN
[Raw transfer]




ANP_A_4(4QNY)
?
[Raw transfer]




4V9_A_3(5BUI)
MK01_HUMAN
[Raw transfer]




ANP_A_5(4H3P)
MK01_HUMAN
[Raw transfer]




046_A_2(4O2Z)
?
[Raw transfer]




046_A_2(4O2Z)
?
[Raw transfer]




35X_A_2(4QP9)
MK01_HUMAN
[Raw transfer]




362_A_3(4QP8)
MK01_HUMAN
[Raw transfer]




4VF_A_2(5BVD)
MK01_HUMAN
[Raw transfer]




4VG_A_2(5BVE)
MK01_HUMAN
[Raw transfer]




F29_B_2(1WZY)
MK01_HUMAN
[Raw transfer]




ANP_A_3(3TEI)
MK01_HUMAN
[Raw transfer]




363_A_3(4QP7)
MK01_HUMAN
[Raw transfer]




4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]




FRZ_B_2(1TVO)
MK01_HUMAN
[Raw transfer]




YIX_A_2(2YIX)
MK14_HUMAN
[Raw transfer]




36O_A_3(4QP4)
MK01_HUMAN
[Raw transfer]




CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]




TT4_A_2(4XNE)
MK01_RAT
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




EDO_A_9(4QTE)
MK01_HUMAN
[Raw transfer]




EDO_A_16(4QTE)
MK01_HUMAN
[Raw transfer]




21 HHSearch 90.3443%-130 - C1 -5CI6 - MPK6_ARATH -
17 PsiBlast_PDB 85.4742%-103 - C1 -5BUJ 6.3 MK01_HUMAN
13 PsiBlast_PDB 85.0642% -80 - C1 -4QTA 7.8 MK01_HUMAN
3 PsiBlast_PDB 84.9041% -74 - C1 -4IZ7 - MK01_HUMAN -
14 PsiBlast_PDB 84.6942% -62 - C1 -4QTE 3.2 MK01_HUMAN
15 PsiBlast_PDB 84.2742%-102 - C1 -5BUE 8.1 MK01_HUMAN
8 PsiBlast_PDB 83.9042% -78 - C1 -4QP8 5.1 MK01_HUMAN
6 PsiBlast_PDB 83.8542% -68 - C1 -4QP4 4.0 MK01_HUMAN
10 PsiBlast_PDB 83.3742% -63 - C1 -1TVO 6.3 MK01_HUMAN
16 PsiBlast_PDB 83.2642% -69 - C1 -5BUI 6.3 MK01_HUMAN
11 PsiBlast_PDB 83.2142% -68 - C1 -1WZY 4.8 MK01_HUMAN
18 PsiBlast_PDB 83.0542% -78 - C1 -5BVD 8.0 MK01_HUMAN
7 PsiBlast_PDB 82.5942% -67 - C1 -4QP7 3.9 MK01_HUMAN
31 HHSearch 82.3341% -71 - C1 -4XNE 4.6 MK01_RAT
5 PsiBlast_PDB 82.1042% -68 - C1 -4H3P 4.8 MK01_HUMAN
4 PsiBlast_PDB 81.8142% -72 - C1 -3TEI 5.6 MK01_HUMAN
9 PsiBlast_PDB 81.4042% -73 - C1 -4QP9 6.7 MK01_HUMAN
20 PsiBlast_PDB 81.2342% -67 - C1 -2OJG 5.8 MK01_HUMAN
19 PsiBlast_PDB 81.1742% -73 - C1 -5BVE 8.9 MK01_HUMAN
24 HHSearch 80.0241% -71 - C1 -4ZZN 6.0 MK01_HUMAN
2 PsiBlast_PDB 78.9141% -33 - C1 -4O2Z 11.1 ?
27 HHSearch 78.5142% -35 - C1 -4O2Z 11.4 ?
29 HHSearch 74.7642% -39 - C1 -2YIX 7.4 MK14_HUMAN
22 HHSearch 74.7040% -28 - C1 -5BYZ 7.2 MK07_HUMAN
28 HHSearch 70.4643% -40 - C1 -2FST 3.3 MK14_HUMAN
34 HHSearch 68.0938% -5 - C1 -4QNY 5.2 ?
32 HHSearch 66.7838% -2 * C1 *4QNY 5.3 ?