@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PKAC1: (2018-07-14 )
MITKAEASKWRLSDLEMRETVGTGTFGRVRLVKHKGTGQYAALKILKKQEILRMKQVDHVMAEASLLQEIDHPFIVSMLRGYMDKNRLYILLEYVVGGELFSHLRKAGKFPNDVSKFYCAEVILAFDYLHNKTIVYRDLKPENILLDQDGNIKITDFGFAKRVTERTFTLCGTPEYLAPEIIQSKGHNKAVDWWALGILLYEMLVGYPPFFDDSPMKIYEKILVGKVLFPRWVDSKARDFIKGLLSLDPTKRLGSLPNGTEDIKNHKYFAEVDWNVVLSKKIPAPIPVRQHKEGDTHYFDKYPDSPLNSLRTLTPAQQDCFANFCNGQYTDE

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A67_A_2(3AGM)
KAPCA_HUMAN
[Raw transfer]

-

A03_A_3(3AGL)
KAPCA_HUMAN
[Raw transfer]




2PY_C_3(2OH0)
KAPCA_BOVIN
[Raw transfer]




8BQ_A_3(4UJB)
KAPCA_HUMAN
[Raw transfer]




ATP_A_3(4WB8)
KAPCA_HUMAN
[Raw transfer]




NVV_A_3(4UJ2)
KAPCA_HUMAN
[Raw transfer]




ANP_A_7(1CDK)
KAPCA_PIG
[Raw transfer]




4PY_C_3(2OJF)
KAPCA_BOVIN
[Raw transfer]




2EA_C_3(2F7E)
KAPCA_BOVIN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




4EA_C_3(2F7X)
KAPCA_BOVIN
[Raw transfer]




6EA_C_3(2F7Z)
KAPCA_BOVIN
[Raw transfer]




3SB_A_3(3OXT)
KAPCA_HUMAN
[Raw transfer]




IQB_A_3(3VQH)
KAPCA_HUMAN
[Raw transfer]




S69_A_3(3POO)
KAPCA_HUMAN
[Raw transfer]




4SB_A_3(3P0M)
KAPCA_HUMAN
[Raw transfer]




1SB_A_3(3OVV)
KAPCA_HUMAN
[Raw transfer]




SS5_A_3(2UZV)
KAPCA_BOVIN
[Raw transfer]




2SB_A_3(3OWP)
KAPCA_HUMAN
[Raw transfer]




NVX_A_3(4UJ1)
KAPCA_HUMAN
[Raw transfer]




L9L_A_5(3L9L)
KAPCA_HUMAN
[Raw transfer]




FS9_A_3(3WF7)
KS6B1_HUMAN
[Raw transfer]




ANP_A_2(4TND)
GRK5_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




YTP_A_3(3OOG)
KAPCA_HUMAN
[Raw transfer]




5VS_A_3(5F9E)
KPCT_HUMAN
[Raw transfer]




3L0_A_3(4RA5)
KPCT_HUMAN
[Raw transfer]




495_A_3(5BX6)
KAPCA_HUMAN
[Raw transfer]




4W1_A_3(5BX7)
KAPCA_HUMAN
[Raw transfer]




BUD_A_4(3POO)
KAPCA_HUMAN
[Raw transfer]




PEG_A_12(5LI9)
KPCI_HUMAN
[Raw transfer]




7 PsiBlast_PDB 91.9653%-106 - C1 -3VQH 6.9 KAPCA_HUMAN
19 PsiBlast_PDB 91.5453%-106 - C1 -4UJ1 6.5 KAPCA_HUMAN
24 HHSearch 90.8453%-103 - C1 -4WB8 9.5 KAPCA_HUMAN
12 PsiBlast_PDB 90.6653%-106 - C1 -3L9L 8.0 KAPCA_HUMAN
8 PsiBlast_PDB 90.6253%-102 - C1 -4UJB 7.5 KAPCA_HUMAN
16 PsiBlast_PDB 90.4353%-105 - C1 -3OXT 6.3 KAPCA_HUMAN
9 PsiBlast_PDB 90.4253%-103 - C1 -5BX6 3.8 KAPCA_HUMAN
15 PsiBlast_PDB 90.4153%-104 - C1 -3OWP 5.8 KAPCA_HUMAN
30 HHSearch 90.0753%-103 - C1 -4WIH - KAPCA_CRIGR -
20 PsiBlast_PDB 90.0753%-106 - C1 -4UJ2 7.2 KAPCA_HUMAN
14 PsiBlast_PDB 89.9953%-104 - C1 -3OVV 6.7 KAPCA_HUMAN
10 PsiBlast_PDB 89.5753%-104 - C1 -5BX7 4.2 KAPCA_HUMAN
13 PsiBlast_PDB 89.3553%-106 - C1 -3OOG 4.5 KAPCA_HUMAN
17 PsiBlast_PDB 89.2753%-107 - C1 -3P0M 6.3 KAPCA_HUMAN
11 PsiBlast_PDB 89.1453%-106 - C1 -3AGM 8.1 KAPCA_HUMAN
5 PsiBlast_PDB 88.9653%-108 - C1 -2OJF 6.8 KAPCA_BOVIN
1 PsiBlast_PDB 88.6053%-109 - C1 -2F7E 7.4 KAPCA_BOVIN
18 PsiBlast_PDB 88.2753%-107 - C1 -3POO 7.3 KAPCA_HUMAN
33 HHSearch 87.8353%-103 - C1 -1RDQ 8.5 KAPCA_MOUSE
6 PsiBlast_PDB 87.6953%-100 - C1 -3AGL 9.8 KAPCA_HUMAN
2 PsiBlast_PDB 87.6653%-104 - C1 -2F7X 7.2 KAPCA_BOVIN
3 PsiBlast_PDB 87.6453%-114 - C1 -2F7Z 7.8 KAPCA_BOVIN
4 PsiBlast_PDB 86.4753%-110 - C1 -2OH0 7.1 KAPCA_BOVIN
35 HHSearch 85.2353%-102 * C1 *2UZV 7.4 KAPCA_BOVIN
49 Fugue 75.2850% -13 - C1 -1CDK 8.8 KAPCA_PIG
22 HHSearch 70.5543% -43 - C1 -4GV1 7.4 AKT1_HUMAN
34 HHSearch 67.5938% -32 - C1 -5F9E 7.5 KPCT_HUMAN
25 HHSearch 65.5038% -36 - C1 -4RA5 4.9 KPCT_HUMAN
28 HHSearch 61.4638% -48 - C1 -3TXO 6.2 KPCL_HUMAN
41 HHSearch 56.9842% -7 - C1 -3WF7 7.9 KS6B1_HUMAN
38 HHSearch 55.7535% -30 - C1 -5LI9 2.4 KPCI_HUMAN
43 HHSearch 49.2230% -35 - C1 -4TND 4.5 GRK5_HUMAN