@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0149: (2017-12-16 )
MSRDIIKLDQIDVTFHQKKRTITAVKDVTIHIQEGDIYGIVGYSGAGKSTLVRVINLLQKPSAGKITIDDDVIFDGKVTLTAEQLRRKRQDIGMIFQHFNLMSQKTAEENVAFALKHSGLSKEEKKAKVAKLLDLVGLADRAENYPSQLSGGQKQRVAIARALANDPKILISDESTSALDPKTTKQILALLQDLNQKLGLTVVLITHEMQIVKDIANRVAVMQDGHLIEEGSVLEIFSNPKQPLTQDFISTATGIDEAMVKIEKQEIVEHLSENSLLVQLKYAGASTDEPLLNELYKHYQVMANILYGNIEILDGTPVGELVVVLSGEKAALAGAQEAIRQAGVQLKVLKGVQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
145 Fugue 93.0344%-140 - C1 -3TUZ - METN_ECOLI -
126 HHSearch 91.3144%-130 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 90.3845%-116 - C1 -3TUI - METN_ECOLI -
125 HHSearch 90.3445%-133 - C1 -3DHW - METN_ECOLI -
21 PsiBlast_CBE 88.8445%-113 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 88.6945%-113 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 88.1445%-108 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 87.8845%-108 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 87.0245%-108 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 86.3345%-112 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 86.2745%-110 - C1 -3TUZ - METN_ECOLI -
4 PsiBlast_PDB 85.6145%-113 - C1 -3TUJ - METN_ECOLI -
1 PsiBlast_PDB 84.3346%-109 - C1 -3DHW - METN_ECOLI -
146 Fugue 61.5228% -86 - C1 -1OXS - ? -
138 HHSearch 60.7634%-121 - C1 -1OXU - ? -
9 PsiBlast_PDB 59.8443% -52 - C1 -4YMW - ? -
131 HHSearch 59.4534%-121 - C1 -1OXX - ? -
28 PsiBlast_CBE 59.3543% -51 - C1 -4YMU 4.6 ?
27 PsiBlast_CBE 58.9043% -53 - C1 -4YMV 3.6 ?
8 PsiBlast_PDB 58.8643% -53 - C1 -4YMV 4.7 ?
7 PsiBlast_PDB 57.6743% -46 - C1 -4YMU 5.2 ?