@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0210: (2017-12-17 )
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNLK

Atome Classification :

(90 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AP5_B_8(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_B_8(2ORI)
KAD_BACSU
[Raw transfer]




AP5_A_8(2EU8)
KAD_BACSU
[Raw transfer]




AP5_A_4(4NU0)
KAD_STRP2
[Raw transfer]




ADP_A_3(3SR0)
KAD_AQUAE
[Raw transfer]




AP5_B_9(2EU8)
KAD_BACSU
[Raw transfer]




AP5_A_3(5G41)
?
[Raw transfer]




AP5_B_8(3DL0)
KAD_BACSU
[Raw transfer]




AP5_B_11(4MKF)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBF)
KAD_BACSU
[Raw transfer]




AP5_A_7(3DL0)
KAD_BACSU
[Raw transfer]




AP5_A_4(4MKG)
KAD_BACSU
[Raw transfer]




AP5_A_4(2P3S)
KAD_BACSU
[Raw transfer]




AP5_A_7(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_B_6(4NU0)
KAD_STRP2
[Raw transfer]




AP5_A_7(2OO7)
KAD_BACSU
[Raw transfer]




AP5_B_6(4NU0)
KAD_STRP2
[Raw transfer]




AP5_B_7(4TYQ)
KAD_BACSU
[Raw transfer]




AP5_B_7(4TYP)
KAD_BACSU
[Raw transfer]




AP5_B_9(2EU8)
KAD_BACSU
[Raw transfer]




AP5_B_8(2OO7)
KAD_BACSU
[Raw transfer]




AP5_A_3(5G3Z)
?
[Raw transfer]




AP5_A_4(1ZIP)
KAD_GEOSE
[Raw transfer]




AP5_A_7(2ORI)
KAD_BACSU
[Raw transfer]




AP5_A_7(2OSB)
KAD_BACSU
[Raw transfer]




ADP_A_3(5G40)
?
[Raw transfer]




AP5_A_5(4MKF)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_A_4(3DKV)
KAD_BACSU
[Raw transfer]




ATF_A_3(1DVR)
KAD2_YEAST
[Raw transfer]




AP5_B_6(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_A_3(1ZIN)
KAD_GEOSE
[Raw transfer]




AP5_B_8(2OSB)
KAD_BACSU
[Raw transfer]




AP5_A_9(4TYP)
KAD_BACSU
[Raw transfer]




ATF_B_4(1DVR)
KAD2_YEAST
[Raw transfer]




ANP_A_4(1ANK)
KAD_ECOLI
[Raw transfer]




AP5_A_3(4TYQ)
KAD_BACSU
[Raw transfer]




AP5_A_3(3FB4)
?
[Raw transfer]




AP5_A_3(4MKH)
KAD_BACSU
[Raw transfer]




AP5_B_8(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_5(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_4(1P3J)
KAD_BACSU
[Raw transfer]




ADP_B_5(3TLX)
?
[Raw transfer]




AP5_A_4(1ZIO)
KAD_GEOSE
[Raw transfer]




ANP_B_6(1ANK)
KAD_ECOLI
[Raw transfer]




ADP_A_4(4IKE)
KAD_AQUAE
[Raw transfer]




AP5_A_3(1S3G)
KAD_SPOGL
[Raw transfer]




ADP_B_6(4JLB)
KAD_AQUAE
[Raw transfer]




AP5_B_3(4QBG)
KAD_BACSU
[Raw transfer]




AP5_B_3(4QBG)
KAD_BACSU
[Raw transfer]




B4P_A_2(2C9Y)
KAD2_HUMAN
[Raw transfer]




ADP_B_6(4IKE)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JL5)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JL5)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_B_7(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_A_4(5G3Y)
?
[Raw transfer]




ADP_A_4(5G3Y)
?
[Raw transfer]




ADP_A_4(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLO)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL5)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLP)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLD)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JKY)
KAD_AQUAE
[Raw transfer]




AMP_B_8(3SR0)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL6)
KAD_AQUAE
[Raw transfer]




AMP_A_3(1ANK)
KAD_ECOLI
[Raw transfer]




AMP_A_3(2ECK)
KAD_ECOLI
[Raw transfer]




ADP_B_6(4JLO)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JLP)
KAD_AQUAE
[Raw transfer]




AMP_B_5(2ECK)
KAD_ECOLI
[Raw transfer]




AMP_B_5(1ANK)
KAD_ECOLI
[Raw transfer]




AMP_A_3(4K46)
KAD_PHOPR
[Raw transfer]




TRS_A_2(4W5H)
KAD_STRP2
[Raw transfer]




AMP_A_4(4JZK)
?
[Raw transfer]




TAR_A_4(3L0S)
?
[Raw transfer]




AMP_B_6(4JZK)
?
[Raw transfer]




AMP_A_4(4JZK)
?
[Raw transfer]




AMP_A_5(2AK3)
KAD3_BOVIN
[Raw transfer]




SRT_A_3(2XB4)
?
[Raw transfer]




AMP_B_6(2AK3)
KAD3_BOVIN
[Raw transfer]




IMD_A_3(3AKY)
KAD2_YEAST
[Raw transfer]




IMD_A_3(1AKY)
KAD2_YEAST
[Raw transfer]




IMD_A_3(1AKY)
KAD2_YEAST
[Raw transfer]




1 PsiBlast_PDB 93.90100% -96 - C3 -4NTZ - KAD_STRP2 -
2 PsiBlast_PDB 93.85100% -92 - C3 -4NU0 15.3 KAD_STRP2
102 HHSearch 93.66100% -97 - C3 -4NTZ - KAD_STRP2 -
22 PsiBlast_CBE 93.06100% -89 - C3 -4W5J - KAD_STRP2 -
4 PsiBlast_PDB 92.98100% -93 - C3 -4W5J - KAD_STRP2 -
21 PsiBlast_CBE 92.81100% -88 - C3 -4W5J - KAD_STRP2 -
3 PsiBlast_PDB 92.78100%-118 - C3 -4W5H 2.6 KAD_STRP2
23 PsiBlast_CBE 92.74100% -95 - C3 -4W5J - KAD_STRP2 -
103 HHSearch 91.42100% -85 - C3 -4NU0 14.9 KAD_STRP2
24 PsiBlast_CBE 91.23100% -83 - C3 -4NU0 14.9 KAD_STRP2
43 PsiBlast_CBE 74.6055% -39 - C3 -4TYQ 14.8 KAD_BACSU
39 PsiBlast_CBE 74.3355% -29 - C3 -4QBG 13.6 KAD_BACSU
11 PsiBlast_PDB 73.9857% -29 - C3 -4MKF 15.7 KAD_BACSU
104 HHSearch 73.9456% -27 - C3 -4QBG 13.6 KAD_BACSU
7 PsiBlast_PDB 73.7458% -33 - C3 -5G3Z 15.7 ?
42 PsiBlast_CBE 73.7255% -31 - C3 -4TYQ 14.9 KAD_BACSU
38 PsiBlast_CBE 73.6855% -33 - C3 -4QBF 14.2 KAD_BACSU
29 PsiBlast_CBE 73.4756% -30 - C3 -3DL0 15.0 KAD_BACSU
67 PsiBlast_CBE 73.4039%-109 - C3 -4IKE 6.9 KAD_AQUAE
13 PsiBlast_PDB 73.4055% -32 - C3 -4MKG 15.5 KAD_BACSU
44 PsiBlast_CBE 73.3355% -40 - C3 -4MKH 14.4 KAD_BACSU
36 PsiBlast_CBE 73.2955% -31 - C3 -2OSB 15.0 KAD_BACSU
20 PsiBlast_PDB 72.9956% -23 - C3 -2ORI 14.6 KAD_BACSU
19 PsiBlast_PDB 72.9756% -27 - C3 -3DL0 15.3 KAD_BACSU
12 PsiBlast_PDB 72.9555% -35 - C3 -3DKV 15.2 KAD_BACSU
10 PsiBlast_PDB 72.8656% -27 - C3 -1P3J 14.9 KAD_BACSU
35 PsiBlast_CBE 72.8353% -30 - C3 -1ZIN 14.8 KAD_GEOSE
31 PsiBlast_CBE 72.7556% -24 - C3 -2OO7 15.5 KAD_BACSU
68 PsiBlast_CBE 72.6539% -96 - C3 -4IKE 9.1 KAD_AQUAE
5 PsiBlast_PDB 72.6458% -25 - C3 -5G40 9.5 ?
115 HHSearch 72.5640% -97 - C3 -4JL5 9.6 KAD_AQUAE
26 PsiBlast_CBE 72.5256% -26 - C3 -2QAJ 15.2 KAD_BACSU
33 PsiBlast_CBE 72.4053% -31 - C3 -1ZIP 14.9 KAD_GEOSE
9 PsiBlast_PDB 72.2659% -23 - C3 -5G3Y 9.2 ?
71 PsiBlast_CBE 72.2539% -96 - C3 -3SR0 8.2 KAD_AQUAE
37 PsiBlast_CBE 72.2055% -29 - C3 -2OSB 14.3 KAD_BACSU
116 HHSearch 72.1840% -98 - C3 -4JL6 7.5 KAD_AQUAE
63 PsiBlast_CBE 72.1239% -97 - C3 -4JL5 9.6 KAD_AQUAE
16 PsiBlast_PDB 71.8856% -24 - C3 -2P3S 15.1 KAD_BACSU
32 PsiBlast_CBE 71.8756% -31 - C3 -2OO7 15.7 KAD_BACSU
62 PsiBlast_CBE 71.8239% -97 - C3 -4JL6 7.5 KAD_AQUAE
61 PsiBlast_CBE 71.7639% -98 - C3 -4JL6 7.7 KAD_AQUAE
54 PsiBlast_CBE 71.7639% -95 - C3 -4JLD 8.4 KAD_AQUAE
8 PsiBlast_PDB 71.7155% -26 - C3 -3FB4 15.4 ?
56 PsiBlast_CBE 71.6039% -99 - C3 -4JLB 7.9 KAD_AQUAE
59 PsiBlast_CBE 71.5939% -95 - C3 -4JL8 9.1 KAD_AQUAE
27 PsiBlast_CBE 71.5956% -23 - C3 -2EU8 15.0 KAD_BACSU
34 PsiBlast_CBE 71.5853% -32 - C3 -1ZIO 14.6 KAD_GEOSE
57 PsiBlast_CBE 71.5039% -94 - C3 -4JLA 8.1 KAD_AQUAE
41 PsiBlast_CBE 71.3955% -31 - C3 -4TYP 13.9 KAD_BACSU
6 PsiBlast_PDB 71.3658% -29 - C3 -5G41 14.3 ?
79 PsiBlast_CBE 71.2138%-102 - C3 -4JLO 7.8 KAD_AQUAE
77 PsiBlast_CBE 71.2138%-103 - C3 -4JLP 8.5 KAD_AQUAE
15 PsiBlast_PDB 71.1956% -23 - C3 -2QAJ 14.8 KAD_BACSU
14 PsiBlast_PDB 71.1753% -33 - C3 -1S3G 15.0 KAD_SPOGL
30 PsiBlast_CBE 71.1556% -24 - C3 -2ORI 15.1 KAD_BACSU
55 PsiBlast_CBE 71.1139% -97 - C3 -4JLB 9.5 KAD_AQUAE
80 PsiBlast_CBE 71.0938%-100 - C3 -4JLO 7.6 KAD_AQUAE
58 PsiBlast_CBE 71.0339% -96 - C3 -4JLA 7.4 KAD_AQUAE
72 PsiBlast_CBE 71.0039% -95 - C3 -3SR0 9.3 KAD_AQUAE
65 PsiBlast_CBE 70.9839%-101 - C3 -4JKY 7.3 KAD_AQUAE
60 PsiBlast_CBE 70.9639% -93 - C3 -4JL8 8.4 KAD_AQUAE
66 PsiBlast_CBE 70.9439%-100 - C3 -4JKY 7.0 KAD_AQUAE
25 PsiBlast_CBE 70.9257% -26 - C3 -4MKF 15.2 KAD_BACSU
17 PsiBlast_PDB 70.8556% -23 - C3 -2EU8 14.7 KAD_BACSU
64 PsiBlast_CBE 70.6739% -95 - C3 -4JL5 9.5 KAD_AQUAE
70 PsiBlast_CBE 70.5239% -90 - C3 -4CF7 7.6 KAD_AQUAE
101 HHSearch 70.3157% -21 - C3 -2EU8 15.0 KAD_BACSU
18 PsiBlast_PDB 70.2652% -33 - C3 -4QBI 14.9 KAD_GEOSE
28 PsiBlast_CBE 70.1352% -31 - C3 -4QBI 15.8 KAD_GEOSE
78 PsiBlast_CBE 69.9638% -98 - C3 -4JLP 7.7 KAD_AQUAE
45 PsiBlast_CBE 69.9653% -34 - C3 -4QBH 15.4 KAD_GEOSE
69 PsiBlast_CBE 69.8939% -90 - C3 -4CF7 9.5 KAD_AQUAE
111 HHSearch 69.7559% -20 * C3 *5G3Y 9.2 ?
46 PsiBlast_CBE 69.0953% -27 - C3 -4QBH 14.9 KAD_GEOSE
40 PsiBlast_CBE 68.7155% -22 - C3 -4TYP 12.8 KAD_BACSU
52 PsiBlast_CBE 67.3243% -44 - C3 -4K46 8.0 KAD_PHOPR
114 HHSearch 66.4041% -42 - C3 -4JZK 7.6 ?
86 PsiBlast_CBE 66.2838% -44 - C3 -4JZK 7.6 ?
76 PsiBlast_CBE 65.5039% -26 - C3 -2AK3 5.0 KAD3_BOVIN
92 PsiBlast_CBE 65.1838% -46 - C3 -1ANK 10.5 KAD_ECOLI
91 PsiBlast_CBE 64.4238% -43 - C3 -1ANK 9.1 KAD_ECOLI
109 HHSearch 63.9440% -27 - C3 -1AKY 2.5 KAD2_YEAST
75 PsiBlast_CBE 63.9239% -25 - C3 -2AK3 5.7 KAD3_BOVIN
48 PsiBlast_CBE 63.8040% -33 - C3 -1AKY 2.5 KAD2_YEAST
85 PsiBlast_CBE 63.4938% -43 - C3 -4JZK 7.5 ?
90 PsiBlast_CBE 63.0738% -43 - C3 -2ECK 8.1 KAD_ECOLI
89 PsiBlast_CBE 62.7538% -44 - C3 -2ECK 8.5 KAD_ECOLI
49 PsiBlast_CBE 62.5940% -30 - C3 -3AKY 3.6 KAD2_YEAST
81 PsiBlast_CBE 62.3538% -19 - C3 -3TLX 7.0 ?